KEGG   Alpha proteobacterium HIMB5: HIMB5_00013090Help
Entry
HIMB5_00013090    CDS       T02250                                 

Definition
formamidopyrimidine-DNA glycosylase Fpg (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
apm  Alpha proteobacterium HIMB5
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:apm00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    HIMB5_00013090
Enzymes [BR:apm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     HIMB5_00013090
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     HIMB5_00013090
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1200392..1201255)
Genome map
AA seq 287 aa AA seqDB search
MPELPEVEIVRLSLSKNIIGKKINKVLIRNRNLRFKLKFSFEKHLKNKFVINIYRFSKYL
IIELNDKSFCIIHLGMSGTIHILKKNKKNIYTNTSFYHSPGLPKKHNHVEISFNDLTLVY
NDPRRFGFFQIVKNKENLTNRFKNYGPEPFDKNFNLDYMANYFKDKKKDIKSFLLDQKFV
SGIGNIYANEILYLSKINPKIPVKKLKKTQFKLLIKNSKKVLLNAIKKGGSTIRDFKNTL
GDTGNFQKEFKVYGRQKLNCLRSNCTGVITKIVQSNRSTFLCKFCQK
NT seq 864 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattaccagaagtagaaattgtacgtctatcattatcaaaaaatataattgga
aaaaaaatcaataaagttttgataagaaatagaaacttaagatttaagttgaagttttct
tttgaaaaacatttaaaaaataaatttgttataaacatttatagattttcaaaatatttg
attattgagctaaatgacaaaagtttctgcatcatacacctaggcatgtctggaactatt
catattttaaaaaaaaataaaaaaaacatatataccaatactagtttttatcattcacct
ggtttgccaaaaaaacataatcatgttgaaatttcctttaatgatttaactttagtttac
aatgatcctagaagatttggtttttttcaaatagtcaaaaataaagaaaatctcacaaat
agatttaaaaattatggaccagagccttttgataaaaactttaatttagattatatggcc
aattattttaaagataaaaaaaaagatattaaaagttttttattagaccaaaaatttgta
tcaggtattggtaacatctatgcaaatgaaattttgtatttatcaaaaattaatcctaaa
attccagtaaaaaaattaaaaaaaactcagtttaaacttttaataaaaaattcaaaaaaa
gttttattaaatgcgatcaaaaagggtggatccacaataagagattttaaaaatacttta
ggagatactggaaattttcaaaaagaatttaaggtgtatggaaggcaaaaacttaattgt
ttaagatcaaattgtactggtgtaattactaaaattgtccaatcaaatagatcaactttt
ctttgcaaattttgtcaaaaataa

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