KEGG T01152: Arcpr

Archaeoglobus profundus: Arcpr_0546

Entry

Arcpr_0546 CDS T01152

Definition

ATP-dependent DNA ligase I (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

apo Archaeoglobus profundus

Pathway

apo03030	DNA replication
apo03410	Base excision repair
apo03420	Nucleotide excision repair
apo03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:apo03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:apo03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:apo03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:apo03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2 Mitoc_L55

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

463201..464868

AA seq 555 aa
MKFREFAEFCAILERVSSTLEMTGRIASFLRRIEDDDDLYNVVHFLMGRVFPPWDERELG
VGIGLVCKALENVSGVSKEKIESMIKDYGDLGLVAERLLKGRGIKSLFAEELTIKRVREI
FDEIASLEGEGSQKRKILLLTGLYGSASPIEARYLTRLILGEMRLGVGEGIMRDAIARAW
GVDAELVERAYMIVNDLGRVAIIAKNEGKEGLKNVKIQLHIPVKMMLAQVAESIEQALRE
MKTIAVEWKYDGSRVQVHYGNGKVTIYSRRLENVTKALPEIVEEIKKCVKEGVILDGEVI
AVKDGKPMPFQEVLRRFRRKHEITKAMEKIPLEAYFFDILYNDGEVIDLPLKERRKILES
VIKESKIIKIAKQVVTNKKEEIERVFKEALDAGHEGAMLKNPNSPYTPGKRGRHWLKLKE
VMETLDLVVVGGEWGEGRRSHLISSFELACLDPRTGKLLRIGQVGTGFTDEDLEELTELF
KPLIVKEEGKKVYFKPKIVFEVAYQEIQKSPKYESGFALRFPRFVRLRDDKGVEDADTID
RVRELYEKQFARAKS

NT seq 1668 nt +upstreamnt +downstreamnt
atgaagtttagagaatttgctgagttttgtgcgatactcgaaagagtctcttcgacactc
gagatgactggaaggattgcatctttcctaagaagaattgaggatgatgacgacctttac
aatgtagttcacttcttaatgggtagggtatttcctccttgggatgaaagggagcttggt
gtcggtattggattagtctgcaaggctcttgagaatgtcagcggtgttagtaaggagaaa
attgagagcatgattaaggattacggcgatttgggtttggtagctgaaagactgcttaag
ggaaggggaattaaaagtttgtttgctgaggaacttaccataaaaagagttagggaaatc
tttgatgaaattgcaagcttggaaggggagggaagtcaaaagagaaagattctgcttctc
acaggtttgtacggctccgcgagtccaatagaggcaaggtacctaacaaggctcattctc
ggcgagatgaggttgggggttggagagggaattatgagagatgcgattgcaagagcatgg
ggagtagacgctgaactcgttgagagggcatacatgatagtaaacgatctgggtagagtt
gcaatcatagctaagaatgagggtaaagaggggttaaagaacgttaagattcagctacat
atcccagttaaaatgatgctcgctcaagtcgctgagagcatagagcaggctttgagagaa
atgaagactatagctgttgagtggaagtacgacggaagtagagttcaggttcactatggt
aacggaaaggtcacaatttattccagaaggcttgaaaacgtcactaaggctttacctgaa
atagttgaggagataaagaagtgcgttaaggagggagtcatactcgatggtgaagttata
gcggttaaagatggcaaacctatgcccttccaagaggtcttgagaaggtttaggagaaag
catgagataaccaaagcaatggaaaagattcctctagaagcttacttcttcgacatactg
tacaacgacggagaagtaatagatttaccgttgaaggagaggagaaagatactggagtcc
gtcataaaggaatcgaagatcataaagatcgctaagcaagtcgttacgaataagaaggaa
gagatagagcgagttttcaaggaggctttggatgcgggacatgaaggggctatgctgaag
aatcccaactcaccttatacacccggtaagaggggaaggcactggctcaagctgaaggaa
gttatggaaaccctcgatttggttgtcgttggaggagaatggggagagggaaggagaagt
catttgataagctccttcgaattagcatgcctagatccgaggactggaaagctcttgagg
ataggacaagttggtacgggtttcacagatgaagatttggaggagttgaccgagctattc
aaaccgcttatagtcaaggaggagggaaagaaggtctacttcaagccgaagatagtattt
gaagtagcctatcaggagattcagaagagtcccaaatacgagagcgggtttgcgctgagg
tttccaaggttcgtaaggttgagagatgataagggtgtagaggatgccgatactattgac
agggttagagagctctacgagaagcagtttgcgagggccaagagctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-APO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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