KEGG T00964: Apre

Anaerococcus prevotii: Apre_0758

Entry

Apre_0758 CDS T00964

Definition

helicase, RecD/TraA family (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

apr Anaerococcus prevotii

Pathway

apr03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:apr03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 Viral_helicase1 HHH_5 AAA_11 HHH Helicase_RecD PhoH AAA_14 DUF2075 NTPase_1 PIF1 AAA_28 T2SE AAA AAA_29 AAA_17 UvrD_C cobW MobB HHH_3 AAA_22 ABC_tran ArgK Thymidylate_kin AAA_18 AAA_16 MMR_HSR1 TrwB_AAD_bind DUF258 MF_alpha_N AAA_5 AAA_25 SMC_N Mg_chelatase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

857999..860158

AA seq 719 aa
MKIKGIVTNIIFRNDENGYTIMAVDTSDSDITCVGTMPFFNEGDNVEMEGDIVYHDKYGE
QFKISSIRLVKPSSREAVVKFLSSGNLKGIGKKTARAIFDVFGKDSVDIVYNDPDKLLRV
DGIGKKKLEDIKLSAEDTRDSRRAIEYLQGLNLSYNLSMKIYKKYGESTVDVVKANPYKL
IEDIRGVGFTMADNIAINMQMDLTSKFRISAGVYYILNTEAEFNGHTCLKYNTLSQKSAN
LLKLEEGRIKEVINDDIIAGKLVLVEIEDINYIYSSNLLKAEKSVAMAIASKINEKYGFD
VKIDYDLSVFSDEQKIAIEKAFESMVLVITGGPGTGKTTIINAICKILSQNGLSYALTAP
TGRAAKRIKESTGEDAYTIHRLLGIRPDEVVAEFNEENPIDKDYIIVDETSMVDIFLMKN
LMAAIGDKTAIILVGDSDQLPSVGPGNVLKDILNTNVESVRLKKIFRQAGKSNIIVNAHR
INQGKYPILNEKDKDFFFIDTAASDFISVLTSLVKERLTKYYNFDPIKDIQILSPSKKTD
WGVVNINDHIQESINKEKNLLKINNKIFKLNDKVMQVRNNYDLKSINHEEDYDEGVYNGD
IGIIENIDKIDESLDVRFDDGRLIRYKKEDIKDLDLSYAITIHKSQGSEFPCVIIPMMQV
APMLLTRNLLYTGVTRARKIVILLGNKKILKTMVDNNKSNRRFTNLSYWIGEMEKVIDD

NT seq 2160 nt +upstreamnt +downstreamnt
atgaagattaaaggcatagtcaccaacattatatttagaaacgacgagaatggatacaca
attatggctgtagacacttcagattctgatataacttgtgttgggactatgccctttttt
aatgagggcgataatgtcgagatggaaggagatatagtctatcacgacaagtatggtgaa
caattcaaaatatcttcaataagacttgtaaagccatcttctagggaagctgtcgtgaaa
tttctatcttctggaaacctaaaaggtattggcaaaaaaactgctagagctatctttgat
gtttttggcaaggattctgtggacattgtctataatgaccctgataagctactaagggta
gatggaattggcaagaaaaagcttgaagatataaagctttctgcagaagatacaagagac
tcgagaagggcaatcgaatacctccaaggactaaatttatcctataatctgtctatgaaa
atttataaaaaatacggtgaatcgacagtcgatgtagtaaaggctaatccctataaatta
atagaagatataaggggagtaggctttactatggccgacaacatagccataaatatgcag
atggaccttacttccaagtttaggatttctgcaggagtctactacatactaaatacagag
gcagaatttaacggtcatacttgtcttaaatacaatactctgtcccaaaaatctgccaat
cttttaaagcttgaagaagggagaataaaagaagtaattaatgatgatataattgctggt
aaattagttttggtagaaattgaggatatcaattatatctatagttctaatctccttaag
gcagaaaaatcagtagctatggctatagcgagtaaaattaatgaaaaatatggtttcgat
gtcaaaatcgactatgatctttctgtgttctctgatgaacaaaaaatagcaatagaaaaa
gcttttgaatccatggtccttgttataactggaggtccaggtacaggtaagactactata
ataaatgctatttgtaaaatactatcccaaaacggcctatcctatgccttaacagcaccg
actggaagggcggcaaagaggattaaggaatcgactggagaagatgcttacaccatacac
aggctattaggtataagacccgatgaagttgtagctgagttcaacgaggaaaatcccata
gataaggactatattatagtcgatgagaccagtatggtcgatatcttcctaatgaaaaat
ttgatggcagcaattggagataagactgcgataatcctcgttggagatagcgaccagtta
ccttcggttggtccgggcaatgttttgaaggatattttaaatacgaatgttgagtctgtt
agacttaagaaaatatttaggcaagcaggtaagtctaatatcattgttaatgcccacagg
ataaaccaaggaaaataccctatcttaaatgaaaaagataaggacttcttctttatcgat
acagctgcttccgacttcatttctgtacttacatccttggtgaaagaaagacttacaaaa
tattataatttcgatcccattaaggacatacaaatcctatccccgtccaagaagactgat
tggggagtggtcaatattaatgatcatatccaagaatctattaacaaggagaaaaatcta
ttaaaaatcaacaacaagattttcaaattaaatgacaaggtcatgcaagttagaaataac
tatgatcttaagtcaattaatcacgaagaggattatgacgaaggtgtctacaatggtgat
attggtataatcgaaaatattgataagattgatgagagtctcgatgtaagatttgatgat
ggtagactaatcaggtataagaaggaagatataaaagatttggacctatcatatgctatt
acaatccataagtcccagggatcagaatttccatgtgtcattattcctatgatgcaggta
gcaccgatgcttcttacgagaaatctcctttatacaggagtgacaagagctaggaaaatc
gtaattcttctaggaaataagaaaatcctaaagactatggtggacaataataaatccaac
aggagatttaccaacctttcctattggataggagaaatggagaaggtcattgatgattga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-APR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (37)   
   Pfam (37)   
All databases (47)   

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