KEGG   Anaerococcus prevotii: Apre_1289
Entry
Apre_1289         CDS       T00964                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
apr  Anaerococcus prevotii
Brite
KEGG Orthology (KO) [BR:apr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apr03032]
    Apre_1289
   03400 DNA repair and recombination proteins [BR:apr03400]
    Apre_1289
Enzymes [BR:apr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Apre_1289
DNA replication proteins [BR:apr03032]
 Prokaryotic type
  DNA Topoisomerases
   Apre_1289
DNA repair and recombination proteins [BR:apr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Apre_1289
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom Toprim RNA_POL_M_15KD Auto_anti-p27 zf-ribbon_3 Toprim_4 TF_Zn_Ribbon Zn_Tnp_IS1595 DNA_ligase_ZBD DZR
Other DBs
NCBI-ProteinID: ACV29312
UniProt: C7RDP9
Position
complement(1386195..1388249)
AA seq 684 aa
MAKNLVIVESPTKARSISKMLGRNYKVMATVGHLRDLPKSKFGVDIENNFEPEYIKVRGR
AKTINELKKEAKKAENVYLATDPDREGEAISWHLQFLLDLDPEAKNRVEFHEITKENVKN
AIKNPRKIDQNLVDAQQARRVMDRIVGYEISPILWKRVKAGLSAGRVQSVALKLIVDKQK
EIDDFVPEEYWTITAHHKEGREKFDSEFYGQINKKIKISNENGADKVLNKIDKDKFEVVK
ITKTKKRRKPQKPYTTSTLQQDASNRLGFSTRFTMQLAQQLFEGIDVGDGSVGLITYMRT
DANRISKEIVGEALSYIKEKYGPEYAGKGNTYGGKKKGSQDAHEAIRPTSIRRNPLEIKE
YLTDQQYKLYKMIWERVVASQMTDYEFLSTQVLFDNNSLIFKTNGKITLFEGFNKLGANK
ENENILPELKEGDVISAESIDKDQHFTKPPARYTEASLVKTLEEFGIGRPSTYSATINQI
ISRNYVELEGRSIFPTDLGKTVNTFLQENFDDVINVEFTREMEDALDNIAEGDRFWKETL
KSFYKDFEKDMKGVKKDGKDYKVRDEILEEKCPKCGKPLAIKHGRNGKFIGCTGFPDCNF
TKSIVKSTGVKCPECEDGTIIEKVSKRGKRFYGCDNYPKCDFALWDPPTGEKCPECGSLL
IHKKNRSTDEIKCSSCDYVKEKRR
NT seq 2055 nt   +upstreamnt  +downstreamnt
ttggctaagaacctagtaatagtagagtctccaaccaaggccagatccatctcaaagatg
ctcggaagaaactacaaggtaatggcaacagtaggccacctccgtgatcttccaaagagc
aagtttggagtggatatagaaaataactttgaaccagaatatatcaaggttaggggacga
gcaaagactataaatgaactaaaaaaagaagcgaaaaaggcagaaaatgtctaccttgcg
acagacccggatagggaaggagaggccataagctggcatttacaatttctcttagacctt
gaccctgaagcgaaaaacagggtagagttccacgagataaccaaagaaaatgtcaagaac
gccatcaaaaacccaaggaaaatcgaccagaacctagttgacgctcaacaggcaaggcga
gtaatggataggattgtaggttacgagataagcccaatcctctggaagagggtcaaggca
ggtttatctgcaggtcgtgtccaatcagttgccctaaagcttatagtagataagcaaaag
gaaatcgacgattttgttccagaagaatactggactataacagcccaccacaaggaaggt
agggagaaattcgactcagaattctatggacaaatcaacaagaaaataaaaataagcaat
gaaaacggagcggataaggtcctaaataaaatcgataaggataagtttgaagttgtaaaa
atcaccaagactaaaaagagaagaaagcctcaaaagccttacacaacctcaaccctccaa
caagatgcctccaatagattagggttttctacaagatttaccatgcagctagcccaacag
ctctttgagggtatagatgtaggagatggaagtgtgggtcttattacctatatgagaact
gacgctaacaggatctctaaggagatcgtaggcgaagccctctcatatattaaggaaaaa
tacggaccggaatatgctggcaagggaaatacctacgggggcaagaaaaagggcagccaa
gatgcccacgaggccataagacctacctctattaggagaaatcctctagagattaaggaa
tacctaacagatcaacaatataagctatacaagatgatttgggaaagagtcgtagcaagc
cagatgacagattacgaattcctatcaacccaagtcctattcgacaacaattccctaatc
tttaagacaaacgggaaaatcaccctatttgaaggtttcaataaattgggagcaaataaa
gaaaacgaaaatatcctaccagagcttaaggaaggggatgtgataagtgctgagtcaatc
gataaggaccaacacttcactaagcctccagcaagatatactgaggcaagtcttgtaaag
accctagaagaattcggcataggtagaccttcaacctattctgctaccatcaaccaaatc
atctcaagaaactacgtagaacttgaaggaagatcaatcttcccaacagatctaggaaaa
accgtaaataccttcctccaagaaaactttgacgatgtaataaacgtagagttcaccagg
gaaatggaagatgccttggataatatcgcagaaggagatagattctggaaagaaacatta
aaatccttctacaaggacttcgaaaaagacatgaagggtgtcaaaaaggacggcaaggac
tacaaggtaagagatgaaatcttagaagaaaaatgcccaaaatgcggaaagcctcttgcc
atcaaacacggaagaaacgggaaattcataggctgtaccggctttccagattgtaacttt
accaaatcaatagtaaaatcaaccggagtcaaatgcccagaatgtgaagacggaacgata
atagaaaaagtcagcaaaagaggcaagagattctacggctgtgacaactacccaaaatgc
gactttgccctatgggacccaccaacaggagaaaaatgtccagaatgcggctctctccta
atccacaagaaaaacaggtccacagacgaaataaaatgctcctcctgtgactatgtcaaa
gaaaagaggagataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (52)   

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