KEGG   Auxenochlorella protothecoides: F751_1753
Entry
F751_1753         CDS       T04132                                 
Name
(RefSeq) Transcription elongation factor B polypeptide 1
  KO
K03872  elongin-C
Organism
apro  Auxenochlorella protothecoides
Pathway
apro04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    F751_1753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:apro04121]
    F751_1753
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_1753
Ubiquitin system [BR:apro04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     F751_1753
   Cul5 complex
     F751_1753
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     F751_1753
SSDB
Motif
Pfam: Skp1_POZ BTB
Other DBs
NCBI-GeneID: 23613144
NCBI-ProteinID: XP_011397762
UniProt: A0A087SGM0
Position
Unknown
AA seq 101 aa
MSQSDTVKLISADGFEFIISREAAYVSNTIKSMLDEQGGFMESETNQITFPGISGAVLER
LCQYCYYKVKYLHTPSTAIPEFKVHRDMALDLLMAANYLDM
NT seq 306 nt   +upstreamnt  +downstreamnt
atgtcacagagcgacactgtgaagctgatcagtgcggacggtttcgagttcatcatcagc
agggaagcggcctatgtgagcaacaccatcaagagcatgctggacgagcaaggaggattc
atggaatccgagaccaaccaaatcacgttccctggcatctccggtgcggtcctggagagg
ctctgccagtactgctactacaaagtcaagtacctgcacacacccagcacggccatccca
gagttcaaggtgcaccgtgacatggcgctggacctgctgatggctgccaactacctcgac
atgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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