KEGG   Auxenochlorella protothecoides: F751_1773
Entry
F751_1773         CDS       T04132                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03020  RNA polymerase
apro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    F751_1773
  09124 Replication and repair
   03420 Nucleotide excision repair
    F751_1773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apro03021]
    F751_1773
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_1773
Transcription machinery [BR:apro03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     F751_1773
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      F751_1773
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac DUF22
Other DBs
NCBI-GeneID: 23613164
NCBI-ProteinID: XP_011397782
UniProt: A0A087SGP0
Position
Unknown
AA seq 313 aa
MVAPKAPQFYSPQVKLRSLTEDYCEFVLSNVNASIANALRRVILAEVPTIAIELVEIESN
TTVLNDEYIAHRLGLVPFVSSRVHDMKTIYEATEDDDWTDVEFTLNVRCTRDETMNVTSD
DLLPADTRFPDVMPVGYDERGSLTRKHKSVLLVKLRKNQELKLRAVARKGIGKDHAKWIP
AATVSYQFLPEITINHDLMDTLTDEQKQAFCAADPRKTFRFNQISKAVEIVDPELYMYDG
EVLAKAAEMGKPGLIDICQRQDTFIFRVEGTGALTPDDMVLTALDVLSGKLQTFGAELDR
EGAELADLTHGML
NT seq 942 nt   +upstreamnt  +downstreamnt
atggtggccccaaaagcaccacagttttatagtccgcaagtaaagcttcgcagcctcaca
gaagactactgcgagttcgtgctcagcaacgtcaatgcgagcatcgcgaacgcactacgc
cgtgtcatactggcagaggtgcccaccatagccatcgagcttgtggagatagagagcaac
acgacagtgctgaacgatgagtacattgcccacagactggggctcgtaccctttgtgtcc
agccgcgtgcatgacatgaagaccatttatgaggccacagaagacgatgactggacagac
gtggagtttactcttaacgtccgatgcactagggacgagacgatgaatgtgaccagcgac
gacttgcttccagctgacacacgcttcccagatgtcatgccagtgggctacgatgagcga
ggctccctcacacgcaagcacaagagcgtcctcctcgtcaagctgcgtaaaaaccaggag
ctcaaactgagagctgtggcacgcaaaggcatagggaaggaccatgcaaagtggatacct
gcggccacggtgtcttatcagttcctaccagagatcaccatcaaccacgatctcatggac
accctgacagatgagcagaagcaggcgttttgcgccgcagaccctcgcaagaccttccgc
ttcaatcagatcagtaaagcggtggaaatcgtcgaccccgagctgtacatgtacgacggc
gaggtgcttgccaaggctgcagagatgggcaagcccggcctgatcgacatctgccagcgg
caggacaccttcatcttcagggtggaggggacgggggcgctcacccccgatgacatggtg
ctcaccgccctcgacgtgctcagcggcaagctgcagaccttcggcgccgagctggacagg
gagggggctgagctggcggacctcacacacggcatgctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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