KEGG   Candidatus Azobacteroides pseudotrichonymphae: CFPG_179
Entry
CFPG_179          CDS       T00792                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
aps  Candidatus Azobacteroides pseudotrichonymphae
Brite
KEGG Orthology (KO) [BR:aps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aps03032]
    CFPG_179
   03400 DNA repair and recombination proteins [BR:aps03400]
    CFPG_179
Enzymes [BR:aps01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CFPG_179
DNA replication proteins [BR:aps03032]
 Prokaryotic type
  DNA Topoisomerases
   CFPG_179
DNA repair and recombination proteins [BR:aps03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CFPG_179
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim SseB_C
Other DBs
NCBI-ProteinID: BAG83442
UniProt: B6YQH0
Position
complement(230818..233139)
AA seq 773 aa
MQKNLVIVESPAKAKTIEKFLGSDYKVLPSYGHIRDLKNKGLSIDINNDFKPEYVISPDK
VEVVKQLRKATKAVETVWLASDEDREGEAIAWHLYIVLGLQESNSRRIVFHEITKNAILN
AIEHPRHIDLRLVNAQQARRVLDRIVGFELSPILWKKIMPSLSAGRVQSVAVRLIVERER
EINNFITESFFRIRALFYLPNNKIIVQSELNKHFKTEEGAKAFLETLKDAIFTIDDINIR
SSKKSPTPPFITSTLQQEAANKAGFSISQTMSIAQKLYDSGLITYMRTDSLNLSSLALND
VQKEIIDKFGDRYVKIRQYQTKIKGAQEAHEAIRPTYISNRMVAGTVQEQRLYQLIWERT
IASQMADAELEKTMVTIGISNNAIDKFHLQGEVVKFDGFFRAHTESIDSKNAEAVLPPMQ
LNEILNLTEATASEHLTRQPLRYTEASLVRKLEKLGIGRPSTYAPIISTIQQRGYVIKGA
KEGKQKLFTTLTLKNKIVSKQTKTEIVGADKNKLIPSDSGIIVNDFLIEHFPIVLEYNFT
ADLEKEFDKIAEGQIGWIELLHKFYNLFHPIVEKVSFTQIGCKVGERILGTDKNGKLISV
KIGRFGSFVQIGSAEDEEKPQFASLVQGQSIESITLEEALALFDLPRTVGIVANKPVIVT
IGRFGPYMKFDNAFISIPKEYDPYHITIEEAEKLIKEKKERDANKIIKFFSENNDLKVLN
GRFGAYIAYKKNNYKIPRGIVPEIISYDDAMEIIEKNPKRKRGNIFLSRGKKS
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgcaaaaaaaccttgtgatcgtagaatccccagctaaagctaaaactattgagaagttt
ttaggtagtgactataaagttttgccaagttatggacatatccgtgatttgaaaaataaa
gggttaagtatagatataaacaatgatttcaaacctgaatatgttatttctcctgataaa
gtcgaagtggttaagcagttgagaaaagcaacgaaagcagtagaaactgtgtggcttgct
tcggatgaagatagggaaggagaagcaatagcatggcatttgtatattgtgttgggatta
caggaaagtaattcgagacggattgtttttcatgagattactaaaaatgcaattttgaat
gctatagagcatcctcgtcatattgatttacgtttggtaaatgctcaacaggcccggcgt
gtcttagatagaattgtaggatttgaattatctcccattttatggaaaaagattatgcct
tcgttatcggctgggcgtgttcaatcagttgctgtgagattgattgttgaaagggagagg
gagattaacaattttatcacggagtcattttttcgtatccgagctttattttatttacct
aataacaaaataattgttcagtcggagttaaataaacattttaaaacagaagaaggtgct
aaagcgtttttggagactctcaaagatgcaattttcactatagatgatatcaatattcgt
tctagtaaaaaatcaccaactccccctttcattacttctactttgcaacaagaagctgct
aacaaagcaggatttagtatatcacaaacaatgtctattgctcagaaattgtatgactct
ggattaatcacttatatgcgaaccgattcgttgaatctttcctctttggcattaaatgat
gtccagaaagagataattgataaatttggggatagatatgtaaaaattcgtcaatatcaa
acaaaaatcaaaggagcacaagaagcacacgaagctattcgtcctacttatataagtaat
cggatggttgcagggacagtacaagaacaacgattgtatcaattaatttgggagagaact
attgcttcccaaatggcagatgctgagttggagaagacaatggtaaccataggaattagt
aataatgcaatagataaatttcatttgcaaggtgaagttgtcaaatttgatggttttttt
agagcacatacagaaagtatcgatagtaaaaatgcagaagctgtccttcctcctatgcaa
ttgaatgaaatattaaatttaactgaagcaacggcttctgaacaccttactcgacaacct
cttagatatacagaggcaagtttggtgcgtaaattggaaaaattaggtattggtcgccct
tctacttatgctccaatcatttcaactattcagcaacgaggttatgtaattaaaggggcg
aaagaaggaaaacagaagctattcactacactcacattaaaaaataaaattgtttccaag
caaacaaaaacagaaatagtaggtgcagataaaaataaattgattccctctgactctgga
attatagttaatgattttcttattgaacatttcccaattgttttagaatacaattttact
gctgatttggaaaaagaatttgacaaaatagcggaaggacaaattggatggatagaatta
ttacacaaattctataatttgttccatcctatagtagaaaaagtatcttttactcaaata
ggatgcaaagtaggtgagcgaatattaggtacagataaaaatggaaagcttatttcagtt
aaaattggacgttttggttcttttgtacaaattggttcagcagaagatgaagaaaaacct
caatttgcttcactcgttcaagggcaatctatagaaagtattacattagaagaagcactg
gccttatttgatttacctcgtacggtagggatagtagcaaacaaacctgtaatagttaca
attggacgttttggtccttatatgaaatttgataatgcatttatttctataccaaaagaa
tatgatccgtatcatattaccatcgaagaagccgaaaaactaatcaaggagaaaaaagag
cgggatgcgaacaagataattaaatttttttctgaaaataatgatttaaaagtattaaat
ggccgttttggggcatatatcgcatacaagaaaaataattataaaattcccaggggaatt
gtgcctgaaataatctcctatgatgatgcaatggaaataattgaaaaaaatccgaagcga
aaaagagggaacatctttcttagtagaggaaagaaatcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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