KEGG   Acetobacter pasteurianus IFO 3283-01-42C: APA42C_21360
Entry
APA42C_21360      CDS       T01818                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
apw  Acetobacter pasteurianus IFO 3283-01-42C
Pathway
apw03410  Base excision repair
apw03430  Mismatch repair
apw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:apw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    APA42C_21360 (recJ)
   03430 Mismatch repair
    APA42C_21360 (recJ)
   03440 Homologous recombination
    APA42C_21360 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apw03400]
    APA42C_21360 (recJ)
DNA repair and recombination proteins [BR:apw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     APA42C_21360 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     APA42C_21360 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      APA42C_21360 (recJ)
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH CDC45
Other DBs
NCBI-ProteinID: BAI18472
Position
2227229..2229061
AA seq 610 aa
MQSSTLQLTEHSEEASSPAVLGVEASLIGRRWAWRAGAEDPALMRLGAALAQQLGIPEIV
GRLLAMRQITPDQASHFLEPKLRALMPDPSSLTDMDKAADRMAKAVQNREVIGIFGDYDV
DGACASAILASFFEELGCTVHTHIPDRMTEGYGPNVAALDNLVAQGASILICVDCGTASA
DILSQVTDKADVIVLDHHKSEDALPPILATVNPNRPDCSSGLHHICAAALAFLAAVATTR
DLRRADWFTADQPPPDLMRQLDLVALATVCDVMPLHGLNRAFVTQGLKIMARRQRTGLNA
LMEIAGVTKAPDAFSCGFALGPRINAGGRIAEAALGLRLLRCPDSFEARQMAERLDAVNR
RRQGVEADILDRAMQQAEAQKEAGHAVILLAGKDWHPGVVGIVAGRIKERFNRPALVGAE
QEDGTIKGSGRSVPGLDLGTVIIAARQAGMLKTGGGHAMAAGFSLTADKLEDFHTFLDTR
LAQAATLPEKVPLTVDAVVSISGATAELAQDMGALAPFGAGNPEPLLAIPRVTVIRADRI
GRDGNTLRLLLKGENNGRLKALLFRAHENPLAAKLEDTTRPALHLAGYLRAESWNGRTDA
TFFIQDAAAA
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgcaaagcagcaccttgcaacttaccgaacattctgaagaagcttcctcccctgctgta
ttgggggtggaagccagcttgattgggcggcgttgggcttggcgtgccggagcagaagat
cctgctcttatgcgcttgggtgctgctttggcccaacaactgggtattccagaaattgtt
ggccgtctgctggccatgcgtcagatcacaccagatcaggcctctcattttctagagccc
aagttgcgggcacttatgcccgatccttccagccttacggatatggataaagctgccgac
cgcatggcaaaagctgtccagaaccgtgaagtaattggtatttttggtgattatgacgtg
gatggtgcctgcgcctccgccattcttgcctctttttttgaagaactcggctgcaccgtt
catacccatatcccagatagaatgaccgaaggatatggccctaacgtagccgcgctggat
aatttggtggcgcaaggcgcttccatattgatttgtgtagattgcggcacagcctcggca
gatattctgtctcaagtcacagacaaagctgatgtgattgtgctggaccatcacaaatcg
gaagatgcccttccccctattctggcaacagttaaccctaaccggcctgactgttcctct
ggcttgcaccatatctgtgccgcagccctcgcctttcttgccgcagttgccactacgcga
gacctaaggcgtgcagactggtttacagcagaccaacctccgcctgatcttatgcgccag
cttgatctggtggccttggcaacggtttgtgatgttatgcccctgcatgggcttaaccgc
gcctttgtaacgcaagggcttaaaattatggcccgccgccaacgcacgggcctgaatgcc
cttatggaaattgctggcgttaccaaagctccggatgctttttcctgcggctttgcatta
gggccacgcatcaatgcaggtggccgtattgcagaagcagctttaggcctgcgcctgctc
cgttgcccagatagctttgaagcccgccagatggctgaacgtctggatgccgtaaaccgc
cgcagacaaggtgttgaggccgatattctggaccgtgccatgcaacaggctgaagcccag
aaagaagctgggcacgctgttattctgctggccggaaaagattggcacccaggtgttgtg
ggtattgtagcagggcgtattaaggaacgcttcaatcggcctgcccttgttggggccgaa
caggaagatggcaccattaaaggttctggccgttctgttcccgggttagatcttggcacc
gtgattattgcagcccgtcaggctggaatgctaaaaacaggcggcggccacgccatggct
gctggcttttcccttaccgctgataagctggaagattttcatacttttctggatactcgg
ttagcacaggcggctacgcttccagaaaaagtgcctcttaccgtagatgcggtggtatcc
atttctggcgccacagcagaactggcgcaggatatgggggcccttgccccatttggtgcc
ggaaacccggagcctctgttagctataccccgtgtaacagttatacgggcagaccgcatt
ggccgagacggcaacacgctgcgcctgcttttaaagggtgaaaataatggccggttgaaa
gcactgctgttccgcgcgcatgaaaaccctttagcggccaaactggaagacacaacacgc
cctgccctacatctcgccgggtatctacgcgcagaaagctggaatggcagaacagacgcc
accttctttattcaggacgctgcggctgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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