KEGG   Amphimedon queenslandica (sponge): 100631571
Entry
100631571         CDS       T02284                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03020  RNA polymerase
aqu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100631571
  09124 Replication and repair
   03420 Nucleotide excision repair
    100631571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aqu03021]
    100631571
   03400 DNA repair and recombination proteins [BR:aqu03400]
    100631571
Transcription machinery [BR:aqu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100631571
  RNA polymerase III system
   RNA polymerase III
     100631571
  RNA polymerase I system
   RNA polymerase I
     100631571
DNA repair and recombination proteins [BR:aqu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100631571
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 100631571
NCBI-ProteinID: XP_003386300
UniProt: A0A1X7UYR6
Position
Unknown
AA seq 149 aa
MAGILFEDIFDVKDIDPDGKKFERVSRLFCESESFKMDLILDVNTQLYPVSLGDKFRLLL
TTTLREDGLPDDGDFLTTDGAPSLADAFEYVMYGKIYRIEGNEGAGDSGRLSAYVSYGGL
LMRLQGDANNLQGFMMDTNVYLLIKKIAF
NT seq 450 nt   +upstreamnt  +downstreamnt
atggcagggattctctttgaagacattttcgatgttaaagacattgatcctgatggaaag
aaatttgaaagagtgtctcgcctgttttgtgagagcgagagtttcaaaatggatctaata
cttgacgtaaatactcagctctaccctgtaagtcttggagacaagttcaggcttttactg
actacaacgctcagagaagacggactaccagatgatggagacttccttactacagacggt
gccccctcactagcagatgcatttgagtatgttatgtatgggaagatatacaggatagag
gggaatgaaggagctggtgattccggaagattatcagcttatgtgtcatatggcggcttg
ctaatgagattacaaggagatgctaataatttacaaggttttatgatggacactaatgtt
tacttgttgataaagaagattgctttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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