KEGG   Amphimedon queenslandica (sponge): 100632485Help
Entry
100632485         CDS       T02284                                 

Definition
general transcription factor IIH subunit 4-like
Orthology
K03144  
transcription initiation factor TFIIH subunit 4
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
Basal transcription factors
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aqu00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    100632485
  Replication and repair
   03420 Nucleotide excision repair
    100632485
Transcription machinery [BR:aqu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     100632485
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
Un
AA seq 446 aa AA seqDB search
MATSCDLLTYLQSLPSAVLTRLYQHPPSCLAVYRSLSELGQLYIMRVLFIERPLPLADIN
SWALPGNNLHAETLSLLNKLHIFEPVLIRTGQQQGYQLNQSYQTNLRILICGGGQLWAVP
GHRGDDKHSRDIPYLNDYADKKWENILNFMVGGSEKLDSEIVQVLQYAGLMSQASSRHPS
FITTLGFQFLLMDTQSQIWQFILQYLNTAQDRGMDLIDCLKFIFQLSFSTLGKDYSTKGL
TESQLTFMYHLCQFGLVYQRKSSSKRYYPTKLVIQLTAGETIGMNTSQAGFIIVETNYRV
IAYTDSKLHIATLALFCQMQYRFPNVAVGTITRESIQQALVHGIKADQIISFLTQHAHHN
MLSKAHILPPTVTDQIKLWEIERNRLSFQEGILYSEFLSVTDYEKVKKYAEDLGVLLWSN
RQRRLMVIHPDRHDEIRHFWKRQKSS
NT seq 1341 nt NT seq  +upstreamnt  +downstreamnt
atggcgaccagttgtgatcttttaacatacttacaatcccttccttctgctgtactaact
cgtctttatcagcatccgccatcttgtctagctgtatacaggtcactatcagaattaggt
caattgtatattatgagagtgttatttatagagcgtccattgcctctagcagatattaac
tcttgggctcttcctggaaacaacttacatgcagagacactctcgctgttgaacaagctc
cacatttttgagccagtactaatcagaaccggacagcagcaaggctaccagctcaaccaa
tcataccaaaccaacctaagaatactaatctgtggaggagggcagctgtgggcggtacct
ggtcaccgtggtgatgacaaacactccagggatattccctacctgaatgactatgcagat
aaaaaatgggagaacattctcaatttcatggttggaggcagcgagaagttggactcagaa
atagttcaagtgttacaatacgctggactcatgagccaggcgtcttcaagacatccatcc
ttcattacaactcttggattccagtttctactaatggacacacagtctcagatatggcag
ttcatactacagtacttaaatacagcacaagatagaggaatggatctcattgattgcttg
aagtttatctttcagttaagtttttcaactcttggaaaggattactctactaaaggtctt
actgaatcgcagctaacgttcatgtatcatttatgtcagtttggtctagtgtatcaaaga
aagagtagctcgaaaagatactaccccacaaaactggtgatacagctaactgcaggtgag
actataggaatgaataccagtcaagcaggtttcattatcgtggagacaaattatcgcgtt
attgcctatacagattccaaacttcacatagccactttagcattgttctgtcagatgcaa
tacaggtttcccaatgttgctgtaggcactattactagagagagcattcaacaggctttg
gttcatggcataaaggcagatcagatcatatcatttttaacacaacacgctcaccataac
atgctctcaaaggcacacatattaccacctactgtaaccgatcagatcaaactgtgggaa
attgaaaggaacaggctaagctttcaagagggtatattatattctgaattcttatctgtc
actgactatgaaaaagtgaagaaatacgcagaggatcttggtgttctgctgtggagtaat
agacaaaggcgactgatggtgatccatcctgacagacatgatgagataagacacttctgg
aaaagacagaaatcatcttaa

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