KEGG   Amphimedon queenslandica (sponge): 100632485Help
Entry
100632485         CDS       T02284                                 

Definition
(RefSeq) general transcription factor IIH subunit 4-like
  KO
K03144  
transcription initiation factor TFIIH subunit 4
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
Basal transcription factors
Nucleotide excision repair
Module
Holo-TFIIH complex
Brite
KEGG Orthology (KO) [BR:aqu00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    100632485
  Replication and repair
   03420 Nucleotide excision repair
    100632485
Transcription machinery [BR:aqu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     100632485
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-ProteinID: 
NCBI-GI: 
NCBI-GeneID: 
Position
Un
AA seq 402 aa AA seqDB search
MRVLFIERPLPLADINSWALPGNNLHAETLSLLNKLHIFEPVLIRTGQQQGYQLNQSYQT
NLRILICGGGQLWAVPGHRGDDKHSRDIPYLNDYADKKWENILNFMVGGSEKLDSEIVQV
LQYAGLMSQASSRHPSFITTLGFQFLLMDTQSQIWQFILQYLNTAQDRGMDLIDCLKFIF
QLSFSTLGKDYSTKGLTESQLTFMYHLCQFGLVYQRKSSSKRYYPTKLVIQLTAGQQSRN
TSQAGFIIVETNYRVIAYTDSKLHIATLALFCQMQYRFPNVAVGTITRESIQQGGQWVQP
YQSIKLFYFQTLTHSPLTNKAHILPPTVTDQIKLWEIERNRLSFQEGILYSEFLSVTDYE
KVKKYAEDLGVLLWSNRQRRLMVIHPDRHDEIRHFWKRQKSS
NT seq 1209 nt NT seq  +upstreamnt  +downstreamnt
atgagagtgttatttatagagcgtccattgcctctagcagatattaactcttgggctctt
cctggaaacaacttacatgcagagacactctcgctgttgaacaagctccacatttttgag
ccagtactaatcagaaccggacagcagcaaggctaccagctcaaccaatcataccaaacc
aacctaagaatactaatctgtggaggagggcagctgtgggcggtacctggtcaccgtggt
gatgacaaacactccagggatattccctacctgaatgactatgcagataaaaaatgggag
aacattctcaatttcatggttggaggcagcgagaagttggactcagaaatagttcaagtg
ttacaatacgctggactcatgagccaggcgtcttcaagacatccatccttcattacaact
cttggattccagtttctactaatggacacacagtctcagatatggcagttcatactacag
tacttaaatacagcacaagatagaggaatggatctcattgattgcttgaagtttatcttt
cagttaagtttttcaactcttggaaaggattactctactaaaggtcttactgaatcgcag
ctaacgttcatgtatcatttatgtcagtttggtctagtgtatcaaagaaagagtagctcg
aaaagatactaccccacaaaactggtgatacagctaactgcaggtcagcaatcaaggaat
accagtcaagcaggtttcattatcgtggagacaaattatcgcgttattgcctatacagat
tccaaacttcacatagccactttagcattgttctgtcagatgcaatacaggtttcccaat
gttgctgtaggcactattactagagagagcattcaacagggtgggcagtgggtacaacct
tatcagagtatcaaattgttctattttcaaacactcactcactctccattgactaataag
gcacacatattaccacctactgtaaccgatcagatcaaactgtgggaaattgaaaggaac
aggctaagctttcaagagggtatattatattctgaattcttatctgtcactgactatgaa
aaagtgaagaaatacgcagaggatcttggtgttctgctgtggagtaatagacaaaggcga
ctgatggtgatccatcctgacagacatgatgagataagacacttctggaaaagacagaaa
tcatcttaa

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