KEGG T04288: AXF14

Actinomyces radicidentis: AXF14_04685

Entry

AXF14_04685       CDS       T04288

Name

(GenBank) DNA topoisomerase IV subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

ard Actinomyces radicidentis

Brite

KEGG Orthology (KO) [BR:ard00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ard03032]
    AXF14_04685
   03400 DNA repair and recombination proteins [BR:ard03400]
    AXF14_04685
Enzymes [BR:ard01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AXF14_04685
DNA replication proteins [BR:ard03032]
Prokaryotic type
  DNA Topoisomerases
   AXF14_04685
DNA repair and recombination proteins [BR:ard03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AXF14_04685

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_2

Other DBs

NCBI-ProteinID:

AMD88426

UniProt:

A0A120KLI9

Position

complement(1110972..1112963)

AA seq 663 aa
MTVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNAVDESLAGFCDHIEVTIQADGGIR
VVDNGRGIPVDEHPTEHKPTVEVVMTILHAGGKFGGGGYAVSGGLHGVGISVVNALSTRV
DTEIRRQGHVWRMSFGDGGHPKTPLVMGEETDATGTTQTFYPDPAIFETVVFDYETLRRR
FQQMAFLNKGLRITLTDEREGHAEEGDEITGTDAAEAAGTQEGVPAHRTVTYCYEHGLRD
YVEFLNKSKKVDLIHPEIIDFEAERMLDETRGISLEIAMQWTSAYSESVHTYANTINTTE
GGTHEEGFRTALTTLINKYGREKGLIKDKDDNLTGDDIREGLTAVISVKLSEPQFEGQTK
TKLGNTEARTFVQQVVYERLGDWLDSHPADAKSIIQKAGQAAAARMAARKAREATRRKGV
LESASMPGKLRDCSSRNAEVCEIFIVEGDSAGGSAVGGRDPEHQAIMPIRGKILNVEKAR
LDRALSSDTIRSLITAFGTGIGEDFDIAKLRYGKIVIMADADVDGQHIATLLLTLLFRYM
RPLIEQGHTYIAMPPLYRLKWSNSDHQFAYSDAERDQFLAAGREAGHRLPKEGGIQRYKG
LGEMNDHELWETTMDPSARILKKVTLDEAADADETFAILMGDDVEQRRSFIQRNAADVRF
LDI

NT seq 1992 nt +upstreamnt +downstreamnt
atcaccgtcctcgagggcctcgaggccgtccgcaagcgccccggcatgtacatcggctcc
acgggcgagcgcggcctgcaccacctcgtctacgaggtcgtcgacaacgccgtggacgag
tccctcgccggcttctgcgaccacatcgaggtcaccatccaggccgacgggggcatcagg
gtcgtcgacaacggccgcggcatccccgtcgacgagcaccccaccgagcacaagcccacc
gtcgaggtcgtcatgacgatcctccacgcgggaggcaagttcggcggcggcggctacgcc
gtctcgggaggcctgcacggcgtcggcatctccgtcgtcaacgccctgtcgacccgagtc
gacaccgagatccggcgccagggccacgtgtggcgcatgagcttcggcgacggcggccac
cccaagacgcccctcgtcatgggagaggagacggacgcgaccggcaccacccagaccttc
tacccggacccggcgatcttcgagaccgtcgtcttcgactacgagaccctgcgccgccgc
ttccagcagatggccttcctcaacaagggcctgcgcatcacgctcaccgacgagcgcgag
ggccacgcagaggagggcgacgagatcaccgggaccgacgccgccgaggcagcgggcacc
caggagggcgtcccggcccaccgcaccgtcacctactgctacgagcacggcctgcgcgac
tacgtcgagttcctcaacaagtccaagaaggtcgacctcatccaccccgagatcatcgac
ttcgaggccgagcgcatgctcgacgagacccgcggcatcagcctcgagatcgccatgcag
tggacgagcgcctactccgagtcggtgcacacctacgccaacacgatcaacacgaccgag
ggcggcacccacgaggagggcttccgcacggccctgacgaccctcatcaacaagtacggc
cgcgagaagggcctcatcaaggacaaggacgacaacctcacgggcgacgacatccgcgag
ggcctcaccgccgtcatctccgtcaagctctccgagccgcagttcgagggccagaccaag
accaagctcggcaacaccgaggcgcgcaccttcgtccagcaggtcgtctacgagcgcctg
ggtgactggctcgactcccacccggccgacgccaagtcgatcatccagaaggccggccag
gccgccgcggcccgcatggccgcgcgcaaggcccgtgaggccacgcggcgcaagggcgtc
ctcgagtccgcctcgatgcccggcaagctccgcgactgctcgagccgcaacgccgaggtc
tgcgagatcttcatcgtcgagggcgactccgcgggcggctcggccgtcggcggccgcgac
ccggagcaccaggcgatcatgccgatccgaggcaagatcctcaacgtcgagaaggcgcgc
ctggaccgggccctgtcctcggacacgatccgctccctcatcaccgccttcggcacgggc
atcggcgaggacttcgacatcgccaagctgcgctacggcaagatcgtcatcatggcggac
gccgacgtcgacggccagcacatcgcgacgctcctgctcacgctgctgttccgctacatg
cgccccctcatcgagcagggccacacctacatcgcgatgccgccgctgtaccgcctcaag
tggtccaactccgatcaccagttcgcctactccgacgccgagcgcgaccagttcctggcc
gccggccgcgaggccgggcaccggctccccaaggagggcggcatccagcgctacaagggc
ctcggcgagatgaacgaccacgagctgtgggagacgaccatggacccctcggcccgtatc
ctcaagaaggtgaccctcgacgaggcggccgacgccgacgagaccttcgcgatcctcatg
ggggacgacgtcgagcagcgtcgttccttcatccagcgcaacgccgcggacgtgcgcttc
ctcgacatctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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