KEGG   Arthrobacter sp. LS16: AFL94_01880
Entry
AFL94_01880       CDS       T04078                                 
Name
(GenBank) DNA glycosylase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
arl  Arthrobacter sp. LS16
Pathway
arl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:arl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AFL94_01880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:arl03400]
    AFL94_01880
Enzymes [BR:arl01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AFL94_01880
DNA repair and recombination proteins [BR:arl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AFL94_01880
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS
Other DBs
NCBI-ProteinID: ALD62909
Position
complement(404238..405065)
AA seq 275 aa
MPEGDSVYRATARLHHALAGKSILRSDFRVPALSTVDLAGYTVSEVLPRGKHLLMRLQPP
ATAEPAFNQPPLTLHSHLLMEGRWDLYGPGARFKRPAHTARVVLACDGVVAVGFDIAQVK
LVPTAEEAQLVGHLGPDLLGPGWDAQAAAANFRAQPHRGIGEALLDQRLMAGVGNIYRCE
VLFLTRLHPLTPVGQVVDLGKVIEMSQRLLEVNKERSRRVTTGLARTREPYWVYGRAGKP
CLRCGAKIQLLKIAAEDSGLERDCYFCPSCQPAAH
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccggaaggcgattccgtttaccgggccaccgcaaggctgcaccatgcgctggccggg
aagagcatcctgcgttcggacttccgggtcccggcactgtccacggtggacctggccggc
tacacggtgtccgaggtcctcccgcgcggcaagcacctgctcatgcggctgcagcctccc
gccacggcggaacctgccttcaaccagccgccgctgaccctgcattcgcacctgctcatg
gaggggcggtgggatctctacggtccgggagcccgcttcaagcgtccggcgcacaccgca
cgcgtggtgctcgcctgcgacggcgtcgtggcggtcggcttcgacatcgcccaggtcaag
ctcgtgcccactgccgaggaagcgcagctggtcgggcatctgggcccggacctgctgggg
cccggctgggacgcgcaggcggcggccgcgaatttccgggcgcagccgcaccgcgggatc
ggcgaggcgctgctggaccagcggctgatggcgggggtgggcaacatctaccgctgcgag
gtcctgttcctcacccggctgcacccactcacgcccgtgggacaggtcgtggacctcggg
aaggtcatcgagatgtcgcagcgcctgctggaagtcaacaaggagcgttcccgcagggtc
accaccggcctggcccggacccgcgagccctactgggtgtacgggcgcgccggcaagccc
tgcctgcgctgcggcgcgaagatccagctgctgaagatcgcggccgaggattcgggcctg
gagcgagactgctacttctgcccttcctgccagccggctgcgcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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