KEGG   Arthrospira platensis: NIES39_E03620
Entry
NIES39_E03620     CDS       T02608                                 
Symbol
rpoB
Name
(GenBank) RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
arp  Arthrospira platensis
Pathway
arp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:arp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NIES39_E03620 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:arp03021]
    NIES39_E03620 (rpoB)
   03400 DNA repair and recombination proteins [BR:arp03400]
    NIES39_E03620 (rpoB)
Enzymes [BR:arp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NIES39_E03620 (rpoB)
Transcription machinery [BR:arp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NIES39_E03620 (rpoB)
DNA repair and recombination proteins [BR:arp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NIES39_E03620 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DUF6061
Other DBs
NCBI-ProteinID: BAI90589
UniProt: A0A9W3ZFK3
Position
2781815..2785198
AA seq 1127 aa
MGGGEILPNPNIPADLEHPSRPLETMTNTTQYESAFELPDLIEIQRSSFRWFLETGLIEE
LESFSPISDYTGKLELHFLARDYKLKQPKYDVDDAKRRDSTYSVQMYVPTRLINKETGEI
KEQEVFIGDLPLMTERGTFIINGAERVIVNQIVRSPGVYYKSEIDKNQRRTYSASLIPNR
GAWLKFETDKNDLVWVRIDKTRKLSAQILLKALGLTNNEIFDALRHPDYFQKTIEKEGEF
SEEDALMELYRKLRPGEPPTITGGEQLLHNRFFDPKRYDLGRVGRHKLNRKLRLSVPDST
RVLTPTDILSAIDYLINLEYDIGETDDIDHLGNRRVRSVGELLQNQIRVGLNRLERIIRE
RMTVGDAETLTPASLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGG
LTRERAGFAVRDIHPSHYGRICPIETPEGPNAGLIGSLATHARVNPYGFIETPYYPVENG
RVRRDLSPVYMTADEEDDLRVAPGDISYDSEGHILGDLVPVRYRQDFTKTSPDQVDYVAV
SPVQIVSVATSLIPFLEHDDANRALMGSNMQRQAVPLLRPERPFVGTGLEAQAARDSGMV
IVSRTDGEVSYVDGAKIRVIDPEGWEIEYELQKYQRSNQDTCLNQRPLVYEGDQVVAGQV
LADGSSTEGAELALGHNILVAYMPWEGYNYEDAILISERLVYDDVYTSIHIEKFEIEARQ
TKLGPEEITREIPNVGEDSLRQLTADGIIRIGAWVESGDILVGKVTPKGESDQPPEEKLL
RAIFGEKARDVRDNSLRVPNGEKGRVVDVRVFTREQGDELPPGANMVVRVYVAQKRKIQV
GDKMAGRHGNKGIVSRILPIEDMPYLPDGRPMDIVLNPLGVPSRMNVGQIFECLMGWAGE
NLKRRFKVIPFDEMFGQEMSRETVHSKLKEAREKLKKDWLFSEEYPGKTIVYDGRTGEPF
DQPVTVGIAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAF
GAAYTLQELLTVKSDDMAGRNEALNAIVKGKAIPRPGTPESFKVLMRELQSLCLDIAVHK
VETNKKDGASKDLEVDLMADESHRVRPPSKPSYDLSVIDDDEQGQRM
NT seq 3384 nt   +upstreamnt  +downstreamnt
atggggggaggcgagattttgcctaaccctaacatcccagcagaccttgaacatcccagc
agacctttagaaaccatgacaaatacaacccaatacgaatcggcatttgaacttcctgat
ttaattgaaattcagcgatcgagttttcgttggtttttagaaaccgggctaattgaagaa
ctggaaagtttctcccccatcagtgattatacagggaaactagaactgcatttcttagcc
agagattacaagctgaaacagcctaaatatgacgtagacgatgccaaacggcgggatagt
acatactccgtgcagatgtacgttcccacgcgactaattaacaaagaaaccggggagatt
aaggagcaggaagtatttatcggagacctgcccttaatgaccgaacgtggcacgtttatt
attaacggagccgagcgagttattgttaaccaaattgtgcggagtccgggggtatactac
aaatcggaaatcgataaaaaccaacgacgtacctatagcgcctctctcatcccgaaccga
ggcgcttggttgaaatttgaaaccgataaaaatgatctagtttgggtaagaattgacaaa
actcgcaaactgtcggctcagatacttctgaaagccctaggattgacgaataacgagata
tttgacgcattgcggcacccggactacttccaaaaaaccatcgaaaaagaaggggaattt
agcgaagaagatgccctgatggagttgtataggaaactgcggccaggggaacctcccacc
atcaccgggggagaacaacttttgcataatcgcttctttgacccgaaacgctatgatttg
ggtcgggtaggacggcataaactgaaccggaaactaaggctgagtgtgcccgatagtacc
agagtcctaacaccaactgatattttatcggcgatcgactacctgattaacctagaatac
gacatcggcgaaaccgatgatattgaccacttgggtaatcgtcgggtgcgttcagtaggg
gaactattgcaaaaccaaatccgagtaggtttaaaccgtttagaaagaattattcgggaa
cggatgaccgttggcgatgccgaaaccctaacccccgcctccctagtgaacccgaaacct
ttggtagcagccatcaaagaatttttcgggtctagccaactgtcccaatttatggatcaa
actaaccccctagcggaattaacccataaacggcgtttatctgccctaggtcccggtggc
ttaacacgagaacgggcaggctttgcggtgcgtgatattcacccaagccactatggtcgt
atctgtcccatcgaaaccccagaaggaccgaacgccggtctaattggctccctggctacc
cacgcccgggttaacccctacggcttcatcgaaaccccttactatccagtagaaaatgga
cgagtgcgccgagatttgtctccggtgtatatgaccgctgacgaggaagacgatctacgg
gtagcaccaggagacattagctatgactccgagggacatatcctcggcgacctagttccg
gtgcgttatcgtcaggacttcaccaaaaccagccccgaccaagtggactatgtagccgtt
tctccggtgcaaattgtctcggtagctacctccctaattcccttcctagaacacgatgac
gctaaccgtgcgctgatgggttccaatatgcagcgccaagcagttcccctgctgcgtcct
gaacgtccgtttgtgggaacgggactagaagcccaggcggcgcgggactcaggtatggtg
attgtatctcgtactgatggagaagtcagttatgtagatggcgcgaaaattcgggttatt
gaccccgaaggttgggaaatcgaatatgaactgcaaaaatatcaacgctctaaccaagat
acctgcttaaaccagcgccccctagtttatgaaggcgaccaagtagtagcaggtcaggtt
ttggctgatggttcctcgaccgagggggcagaattagccctgggtcataacattttagtt
gcctatatgccctgggaaggctacaactacgaagacgcaatcttaattagtgaacgtctg
gtttatgacgatgtttatacctcaatccatatcgaaaaatttgagattgaggcgcgacaa
acgaaactaggacctgaagaaattacccgcgaaataccgaacgttggggaagactccctg
cgacaacttacagcggacgggattattcggattggtgcttgggtagagtcgggagatatt
ctggtaggaaaggtaacccccaaaggagagtctgaccaacccccagaagaaaaactgctg
cgggctatctttggagaaaaagccagagatgtgcgagataactccctgcgggttcctaat
ggtgaaaaaggccgggtggtcgatgtgcgggtgttcacccgagaacaaggcgatgaactg
cccccaggagctaatatggtggtgcgggtctatgtggcgcaaaaacgcaaaattcaggtg
ggagacaaaatggcgggccgccacggcaataaggggattgtctcgcgtattcttcccatt
gaagatatgccctatctgccggatggtcggccgatggatattgtcctgaatcccctgggt
gtgccttctcgtatgaatgttggtcaaatctttgagtgtttgatgggatgggcgggagaa
aacctgaaacggcggtttaaggtgatcccttttgatgaaatgtttggtcaagaaatgtcc
cgtgagacagtccacagcaaacttaaagaagcccgcgaaaaactcaaaaaggattggtta
tttagtgaggaataccccggcaaaactattgtttatgacggccgcacgggagagccgttt
gaccaacctgtaacggtgggtattgcttatatcctcaagttggttcacttggtggatgat
aagattcacgcccggtctactggtccttattcgttggtgactcaacagcccttgggtgga
aaggcacaacagggcggtcagcggttcggagaaatggaggtgtgggcattggaagcgttt
ggggcagcctatactttgcaagagttgctaacggttaagtctgatgatatggcgggccgt
aatgaagccctaaatgcgattgtgaaaggcaaagctatcccccgtcccggtacgccagaa
tcctttaaagtgctgatgcgggagttgcaatctttgtgtttggatattgcagtccataag
gtggaaactaacaaaaaggatggtgctagtaaagatttggaggtagacctgatggctgat
gagtctcaccgagtcagaccaccttctaagcctagctatgatttgagcgtcattgatgac
gacgaacagggccaacggatgtag

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