KEGG T02215: ARUE

Arthrobacter sp. Rue61a: ARUE_c40090

Entry

ARUE_c40090 CDS T02215

Gene name

lig

Definition

DNA ligase Lig (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

arr Arthrobacter sp. Rue61a

Pathway

arr03410	Base excision repair
arr03420	Nucleotide excision repair
arr03430	Mismatch repair
arr03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:arr03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:arr03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:arr03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:arr03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

403529032

NCBI-GeneID:

13562485

UniProt:

J7LZT1

Position

complement(4401510..4402574)

AA seq 354 aa
MDLPVMPPVSPMLAKSVPTIPDVGHYEPKWDGFRTIVFKDGDEIVLGSRNEKPMTRYFPE
VVEALRKNLPDKCVIDGEIVLIEGKRLEFEVLQQRIHPADSRVRMLAEKTPASMIAFDIL
ALGDENLMDKPFSERRAILERTLAKADPPVYVTPAVTDLERAQEWFVQLEGAGLDGVLSK
PLDGAYQPNKRVMFKTKHERTADCVVAGFRWHKTAKVVGSMLLGLHDDTGRLHHVGVVAS
FPMARREALVAELEPYQVELSEHPWGEWANQDETAGGSRMPGAQSRWSGGKDFSFVPLRP
ELVIEVKYDYMEGDRFRHTTQFRRWRPDRTPESCTYSQLEEPADYDLGEILRLP

NT seq 1065 nt +upstreamnt +downstreamnt
atggacctgcctgtgatgccacccgtctcgcccatgctcgccaaatccgttccgacaatc
cccgatgttgggcactacgagcccaaatgggacgggttccggaccatcgtcttcaaggat
ggcgacgagatcgtcctgggcagccgcaacgagaagccgatgacccgctacttccccgag
gtggtggaggcgctcaggaagaacctgccggacaaatgcgtgatcgacggcgagatcgtc
ctgatcgagggcaagaggctcgaattcgaggtactccagcaaaggatccaccccgccgac
agccgcgtccggatgctcgccgagaagaccccggcgtccatgattgcgttcgacatcctc
gcgctgggcgacgagaacctcatggacaagccgttctccgagcgccgcgccatcttggag
cgtacgctcgccaaggccgatccgcctgtctatgtgacccccgcagtgacggatctcgag
cgggcgcaggaatggttcgtgcagttggaaggcgcgggactggatggggtgctgtccaag
ccgttggacggggcctaccaacccaacaagcgcgtgatgttcaaaaccaaacacgagcgc
acggcagactgtgtggtggcgggattccgttggcacaagaccgcgaaagttgtggggtcg
atgttgctcggcctgcacgatgacactggccggctgcatcatgtgggagtggtggcatcg
ttccctatggcccgcagggaagctttggtggcagaactggagccgtaccaggttgaactc
agcgagcacccatggggtgagtgggccaaccaggatgaaactgccgggggttcacgcatg
cccggcgcccaaagccggtggagcgggggtaaggacttctccttcgtgccgctgcgcccc
gagctggtgatcgaagtaaagtacgactacatggaaggcgacaggttccggcacaccacg
cagttccgtaggtggcggccggacaggacccccgagagctgcacgtactcgcaactggaa
gagcctgccgactacgatctcggggaaatcctgaggctgccctag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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