KEGG T00421: Arth

Arthrobacter sp. FB24: Arth_0294

Entry

Arth_0294 CDS T00421

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

art Arthrobacter sp. FB24

Pathway

art03410	Base excision repair
art03420	Nucleotide excision repair
art03430	Mismatch repair
art03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:art03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:art03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:art03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:art03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S DNA_ligase_OB_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(307939..310476)

AA seq 845 aa
MAGSRERVRIQGRELVVTNLDKVMYPETGTTKADVLAYYTAVAPVLVPAAVNRPATRKRW
VNGVGTAEAPGEMFFQKNLEDSTPGWIPRASIRHKERTNQYPLVNDAATLIWLAQMGSLE
IHVPQWRVDPHGNPMNPDRLVLDLDPGEGAGLAECAEVARLARAILRDVGLDPIPVTSGS
KGVHLYAGLDGTQSSDQISEFAHELARALESDHPDLAVSDMKKTLRTGKVLVDWSQNNAA
KTTIVPYSLRGRLRPTVAAPRTWRELASPKLKQLDYREVMRRVKDGKDPFAPVSAGGSHV
RGHPGGGGSAAGPRDSTTADGGSTDPRLEKYRSMRDPEGTPEPFSADRHGADPNAGTIRE
RFVIQEHHASRLHYDFRLERDGVLVSWALPKGVPTSGTQNHLAVQTEDHPMDYLDFEGTI
PKGQYGAGNVTIWDHGYYECDKWIAGKEVIATLTGADGGGLGGTRKFALIRTSRDSDTSK
SPEQAQWLIHLMDRKGHAPAATGTPPATGGPAEAAKQDEPPPDLSPAPDFLPMMASAGTP
ADLRGLDWQFELKWDGIRALIIGDADRIRLISRNGNDMTASYPELTDRSCWPEQSFTADG
EIVAVGPSGRPDFGLLQTRMKLTKAADVAKARAATPVRLMVFDLLSDAGEDLRRMPLRRR
RARLEQLDWPDGCPVHLSEVLDHEVEHILESARELGLEGIMAKRLDGRYVSGERSRSWLK
LKFERTQEVVVGGWRPGKGSRQGSVGSLLVGIPDGAKLRYVGRVGSGFSDRELKELRLQV
DTLSRKTSPFTEVPAADASDAHWVAPGLVGEVTFGEWTGGGKLRHPVWRGWRLDKNADDV
VAESG

NT seq 2538 nt +upstreamnt +downstreamnt
ttggccggcagtagggaacgtgtccggatccagggccgcgaactggtggtcaccaacctg
gacaaggtgatgtacccggagaccggcaccaccaaggcggacgtcctggcgtactacacc
gccgtagcgccggttcttgtccccgccgcggtgaaccggcccgccacccgcaagcgctgg
gtcaacggggtgggcaccgcggaggcaccgggcgaaatgtttttccagaagaacctggag
gactccacgcccggctggattccgcgagcctcgatccggcacaaggagcgcaccaatcag
tacccgctggtcaacgacgccgccaccctgatctggctggcccagatgggttcgctggaa
atccacgtcccgcagtggcgcgtggacccgcacggcaatcccatgaacccggaccggctg
gtgctggaccttgaccccggcgagggcgccgggctggccgagtgcgccgaagtggcacgg
ttggcccgcgccatcctgagggacgttggcctggatcctatcccggtgaccagcggcagc
aagggcgtccacctctacgccggcctcgacggcacacagagctcggaccagatctccgag
ttcgcccacgaacttgcccgcgccctggaatcggaccacccggacctggctgtcagcgac
atgaagaagaccctccgcacaggcaaggttctggtggactggagccagaacaacgcggcg
aagaccactatcgtcccgtactcccttcgcggccggctccgccccactgtggcggccccc
aggacgtggcgtgagttggcctcccccaagctgaagcaactggactaccgggaggtcatg
cggcgggtcaaggacggcaaggatccgttcgcgccggtctccgcgggcggcagccacgtg
cggggccatcccggcggcgggggctccgccgccgggccccgcgacagtacaactgccgac
ggcggcagcacggacccgaggctggaaaagtaccgctccatgcgggatccggaagggacc
cccgaaccgttcagcgccgaccgtcacggggctgaccccaacgccggcaccatcagggag
cggtttgtgatccaggagcaccacgccagccggctgcattacgacttccggctggagcgg
gacggcgtgctggtgtcctgggcgcttccgaaaggcgtaccaacctcagggacgcagaac
caccttgcagtccagaccgaagaccaccccatggactacctcgatttcgagggcaccatc
cccaaaggccagtacggcgcagggaacgtcaccatctgggaccacggctactacgaatgc
gacaaatggatcgcaggcaaggaagtcatcgcaaccctcacgggggcggacggcggcggc
cttggcgggacccggaagttcgcactgatccggaccagccgggacagcgacacctcgaaa
tcgccggagcaggcccagtggctcatccatctgatggaccgcaaagggcacgcgccggca
gccacaggcactcccccggccacaggtggccccgcagaggcagcgaagcaggacgagccg
ccgccggacctctcgccggcgccggatttcctgccaatgatggccagcgccgggaccccg
gccgacctccgcggcttggactggcagttcgaactgaaatgggacggtatccgtgcgctc
atcatcggcgacgccgaccggatccggctcatcagccgtaacggcaatgacatgaccgca
agctacccggaactgacggaccgcagctgctggccggagcagagcttcaccgccgacggc
gagatcgtcgccgtcggaccttccgggcggcccgatttcgggctgctacagacgcggatg
aaactgaccaaagcggccgacgtcgccaaagcgcgggcagcgactccggtccggctcatg
gtgttcgacctgctgtccgacgcaggcgaggacctccgcaggatgcccctccggaggcgc
cgggcacgtttggagcagttggattggccggacggctgccccgtgcacctgtccgaagtc
ctggaccacgaggtggagcacatcctcgagagcgccagggaacttggcctcgaaggaatc
atggccaagcgccttgacggccgatatgtaagcggcgagcgcagcaggtcctggctgaag
ctgaagttcgagcgcacccaggaagtggtggtgggcggctggcgccccggcaaggggtcc
aggcaaggctccgtggggtcattgctggtgggcatccccgatggcgccaagctgcggtac
gtgggacgcgtgggcagcggattcagcgaccgggaactgaaggaactgcggctgcaggtg
gacacgctgtccaggaagacctcacccttcaccgaagttcccgctgccgacgcctccgat
gcccactgggtggctcccggactggtgggcgaagttaccttcggggaatggaccggcggc
gggaaactaaggcacccggtatggcgcggctggcgcctggacaagaacgccgacgacgtc
gtggcggaatccggatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ART (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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