KEGG   Aeromonas salmonicida subsp. salmonicida A449: ASA_3997
Entry
ASA_3997          CDS       T00500                                 
Symbol
ssb
Name
(GenBank) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
asa  Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03030  DNA replication
asa03430  Mismatch repair
asa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ASA_3997 (ssb)
   03430 Mismatch repair
    ASA_3997 (ssb)
   03440 Homologous recombination
    ASA_3997 (ssb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asa03032]
    ASA_3997 (ssb)
   03400 DNA repair and recombination proteins [BR:asa03400]
    ASA_3997 (ssb)
   03029 Mitochondrial biogenesis [BR:asa03029]
    ASA_3997 (ssb)
DNA replication proteins [BR:asa03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ASA_3997 (ssb)
DNA repair and recombination proteins [BR:asa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     ASA_3997 (ssb)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    ASA_3997 (ssb)
Mitochondrial biogenesis [BR:asa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    ASA_3997 (ssb)
SSDB
Motif
Pfam: SSB tRNA_anti-codon
Other DBs
NCBI-ProteinID: ABO91946
UniProt: A4SSS4
Position
complement(4289907..4290497)
AA seq 196 aa
MASRGINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTEWHRVVF
MGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQGGQERYTTEVLVDSFSGVMQMLGGRPQG
GAGQNMGGQPQAQGNWGQPQQGMPAQQPVNQARPAAAPQQNMQQPQGGYGRPAQQPQSAP
PVYNEPPMDFDDDIPF
NT seq 591 nt   +upstreamnt  +downstreamnt
atggccagtcgaggcatcaataaagtcattctgatcggtaacctgggacaagacccggaa
gtacgctacatgccgagtggcggtgccgtgaccaatatcaccctggccacctctgaaacc
tggcgcgacaagcagaccggtgagcagaaagagcgtaccgaatggcaccgtgtggtattc
atgggcaagctggccgaagtggctggtgagtacctgaagaagggctcccaggtctatgtc
gaagggaaactgcagactcgcaaatggcaggatcaaggtggccaagagcgttataccacc
gaagtgctggtagacagcttcagtggcgtgatgcagatgctgggtggtcgcccgcaaggt
ggcgcaggccaaaacatgggtggccaacctcaagcgcaaggcaactggggtcaaccgcaa
caaggcatgccagcccagcagccggtaaaccaggctcgtcctgccgccgcaccgcagcag
aacatgcagcagccacaaggcggttatggtcgtccggcccagcagccccagtcagcaccg
cctgtctacaacgagccgccgatggacttcgacgacgatatcccgttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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