KEGG   Actinoplanes sp. SE50/110: ACPL_1298Help
Entry
ACPL_1298         CDS       T02044                                 
Gene name
ligB
Definition
ATP-dependent DNA ligase (EC:6.5.1.1)
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
ase  Actinoplanes sp. SE50/110
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:ase03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ase03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ase03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ase03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1346423..1347970
Genome map
AA seq 515 aa AA seqDB search
MGIVRFLDIAATSAAVAATGGRKAKIELLAHALRRLEPDEIAAGSAYLAGELRQRQTGVG
YAGLRERPAPALEPTLTVAGVDASIAEIATVAGAGSQARRRQLLGALFGAATADEQRLLT
GLFSGELRQGAQAGLLTEAIAVAAAVPVTGVRRALLLSGDLKQVAAAALTGGAAALAAIS
LRVGTPLTPMLAQSAPDIAAALLATGTPAVVDTKLDGIRIQVHRSGDEVAVFTRSLDDIT
ERLPGVVAAARALPLREVVLDGEAMALDEQGRPRPFQETSSRAATRAKTGGTDAAAVLVP
YFFDLLHLDGTDLLDEPGRVRWAALADALPAGLIVGRQTVETQEQGAAAFAAALAAGQEG
VVVKAPDAPYDVGRRGSAWVKVKPRHTLDLVVLAVEWGHGRRRGWLSNLHLGARDPETGG
FVMLGKTFKGLTDELLRWQTERFKELAVDDNGWVVRVRPEQVVEIAFDGVQTSPRYPGGV
ALRFARVLRYRDDKPAAEADTIDAVRAIGGGAVTS
NT seq 1548 nt NT seq  +upstreamnt  +downstreamnt
atggggatcgtgcggtttcttgacattgcggccacgtcggcggcggttgcggcgaccggc
gggcggaaagcgaagatcgagctgctcgcgcacgcgctgcggcggctggagccggacgag
atcgcggccggttccgcgtatctcgccggggagctgcggcagcggcagaccggtgtcggc
tacgccggcctgcgagagcggccggccccggcgctggagccgacgctgaccgtcgccggc
gtggacgcgtcgatcgccgagatcgccacggtcgcgggagcgggctcccaggcgcggcgg
cggcagctgctcggcgcgctgttcggcgcggcgaccgcggacgagcagcggctgctgacc
gggctgttcagcggggagctgcgccagggcgcgcaggccgggctgctgaccgaggcgatc
gcggtggccgcggcggtgccggtcaccggcgtacgccgcgccctgctcctgtccggcgat
ctgaagcaggtcgcggccgcggccctgaccgggggagcggccgcgctcgccgcgatcagc
ttgcgggtgggcacaccgctcaccccgatgctcgcgcagagcgcgccggacatcgccgcc
gctctgctggccaccggcaccccggcggtggtcgacaccaagctcgacggcatccgcatc
caggtgcaccgctccggcgacgaggtggccgtcttcacccgcagcctggacgacatcacc
gaacgcctgcccggcgtggtcgccgcggcccgggcgttgccgctgcgcgaggtggtgctc
gacggcgaggcgatggcgctcgacgagcagggccggccccgcccgttccaggagacgtcg
agccgcgccgccacccgggcgaagacgggcgggaccgacgccgcggccgtgctggtgccg
tacttcttcgacctgctgcacctggacggcaccgatctgctggacgagcccggccgggtg
cgctgggccgcgctggccgacgcactgccggcggggctgatcgtcggccggcagaccgtg
gagacgcaggagcagggggccgccgcgttcgccgccgccctggccgccggacaggagggc
gtcgtggtcaaggctcccgacgcgccgtacgacgtgggccgccgcggctccgcctgggtg
aaggtgaagccccggcacaccctggacctggtggtgctggccgtcgagtggggacacggg
cggcgccgcggctggctgtccaacctgcatctgggcgcccgggatccggagaccggcggg
ttcgtcatgctgggcaagacgttcaagggcctcaccgacgagctgttgcgctggcagacc
gaacggttcaaggaactcgcggtcgacgacaacggctgggtggtgcgggtccggccggag
caggtggtcgagatcgcgttcgacggggtgcagacgtcgccgcgctatccgggcggggtc
gcgctgcgcttcgcccgggtgctgcgttatcgcgacgacaagccggccgccgaggcggac
accatcgacgcggtccgggcgatcgggggcggcgccgtgacctcctga
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