KEGG   Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_0032
Entry
SFBM_0032         CDS       T01591                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
asf  Candidatus Arthromitus sp. SFB-mouse-Japan
Pathway
asf03030  DNA replication
asf03430  Mismatch repair
asf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SFBM_0032
   03430 Mismatch repair
    SFBM_0032
   03440 Homologous recombination
    SFBM_0032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asf03032]
    SFBM_0032
   03400 DNA repair and recombination proteins [BR:asf03400]
    SFBM_0032
Enzymes [BR:asf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SFBM_0032
DNA replication proteins [BR:asf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SFBM_0032
DNA repair and recombination proteins [BR:asf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SFBM_0032
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 TIP49 DNA_pol3_gamma3 RuvB_N AAA_14 AAA_18 AAA_30 AAA_5 DNA_pol3_delta AAA_19 AAA_assoc_2 TmcA_N AAA_16
Other DBs
NCBI-ProteinID: BAK55815
UniProt: F9VI57
Position
40480..41961
AA seq 493 aa
MDNNSLYIKYRPVKFKDICGQENVSSILKNQVKSHKFSHAYLFSGIRGTGKTTCARIFAK
AINCINNVNGEPCYECRSCNSTYEILNIVELDAASNNSVDQIRTLVEELRYSNFVDGYKV
YILDEVHMLSISAFNALLKSLEEPPSNVVFILSTTEIKKIPKTIISRCQKFEFKNIDNKN
IIDRLKYIVESENISIDFESISLISKLADGSMRDAISILERVMLSADNITFEHSRRILGI
TSSEMIFDIIDNLRLNKLNKILLIISKIFEDSLNIKSFINDFRNVLRDIMFLKINKENLN
ILIEKNSLNIKNIMAISEILDFDYIYMVLSELNKINDMGNLSDIEYRVYLEMLIVRIVYD
GGESLLNKSGFDLQSEVKKSDFNDTANKNIKFDKWNDFLKYLKMNKHMVLYSLLTNGDLK
DMSSDSIVFKCNTEGILNRLKKRDTLREIKTNLFDFFGGSIEFELFFSNEVEEDNIQHKL
KGYFGDEIEIQNK
NT seq 1482 nt   +upstreamnt  +downstreamnt
atggataataattctttatacattaagtatagacctgttaagtttaaagatatatgcggt
caggaaaatgtgtctagtatattgaagaatcaagtcaaatcgcataaattttctcatgca
tatttgttttctggaataagaggtactggtaagactacttgtgcaagaatttttgcgaaa
gctataaattgtataaataacgttaatggtgagccgtgttatgaatgtagatcttgtaat
tctacatatgaaattcttaatatagttgagctagatgctgcatctaataatagtgtagat
cagattagaacactagttgaagaattaagatattcaaattttgtagatggatataaagtt
tatattttagatgaggttcatatgctctcaataagcgcttttaatgcgttacttaagagt
ttagaagagcccccatcaaatgttgtttttattttatcgacaactgaaataaaaaagata
cctaaaacgattatatctagatgtcagaaatttgagtttaagaatatagataataaaaac
ataatagatagactaaaatacatagttgaaagtgaaaatataagtattgatttcgagtca
atttcattaatatctaaattagctgatgggtctatgagggatgctataagtattttggag
agagtgatgttgtcagctgataatattacatttgagcattctcgtaggattttaggtatt
acatctagtgagatgatattcgatattatagataatttaagattaaataagttaaataag
attcttttaataatatcaaaaatatttgaagatagtcttaatattaaaagttttattaat
gatttcagaaatgtattgagagatattatgtttttaaaaataaacaaggaaaatttaaac
atattaattgaaaaaaatagtttaaatataaagaatattatggctatatcagaaattttg
gattttgattacatatatatggttttaagtgaattaaataaaataaatgacatgggaaat
ttaagtgatattgagtatagagtttatttagagatgcttatagtaagaatcgtatatgat
ggtggagaatctttgttaaacaaatcaggttttgatttgcagagcgaagtaaaaaaatct
gattttaatgatactgcaaataaaaatattaaatttgataaatggaatgattttttaaag
tatctcaagatgaataaacatatggttctatattctcttttgactaatggagatttgaag
gatatgagtagtgatagtattgtttttaagtgcaatacagagggaatattaaatagattg
aaaaagagagatacacttagggaaattaaaacaaatttgtttgatttttttggaggtagt
atagaatttgagttatttttctcaaatgaagttgaggaagacaatattcaacataagtta
aaaggttattttggtgatgagatagaaatacaaaacaagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (68)   

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