KEGG   Alistipes shahii: AL1_00730
Entry
AL1_00730         CDS       T02578                                 
Name
(GenBank) transcription termination factor NusA
  KO
K02600  transcription termination/antitermination protein NusA
Organism
ash  Alistipes shahii
Brite
KEGG Orthology (KO) [BR:ash00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ash03021]
    AL1_00730
   03009 Ribosome biogenesis [BR:ash03009]
    AL1_00730
Transcription machinery [BR:ash03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     AL1_00730
Ribosome biogenesis [BR:ash03009]
 Prokaryotic type
  rRNA transcription factors
   AL1_00730
SSDB
Motif
Pfam: NusA_N KH_5 S1 KH_2 HAS-barrel
Other DBs
NCBI-ProteinID: CBK62799
UniProt: D4IIM5
Position
complement(99909..101138)
AA seq 409 aa
MDNLNLISNFAEFKELKNIDKSTMIGVLEDVFRHALQKQYETDENFDVIINPEKGDLEIW
RNRTVVEDDAVEDPNAQISVSEVKAIDPTYEIGDEYADEIKLSSFGRRAVLSLRQNLASR
ILDLEKASLYEKYSEKVGDIVTGEVYQVWKKEVLILDDEENELILPKAEQIPNDFYRKGD
TIKAIVKSVEMNNNQPRIILSRTANQFLERLFEQEVPEIFDGLITIKKIVRIPGERAKVA
VESYDERIDPVGACVGMKGSRIYSIVKELRNENIDVVNYTANPTLMIQRSLNPAKVSSIT
IDEEKMTASVYLKPDQVSLAIGKGGLNIRLSKMLTGYDIDVYREVEEEDVALTEFADEID
GWVIDALKAAGCDTAKSVLELPVEEIAARADLELEQAQKVVEILKAEFE
NT seq 1230 nt   +upstreamnt  +downstreamnt
atggacaatctcaatctcatcagcaactttgccgaattcaaagagctgaagaacatcgac
aagtcgacgatgatcggcgtgctggaggacgtcttccgccacgcgctgcaaaaacagtat
gaaacggacgagaatttcgacgtcatcatcaaccccgagaaaggcgacctcgaaatctgg
cgcaaccgcacggtcgtcgaggacgacgccgtcgaagaccccaacgcacagatttccgtc
tcggaggtcaaggccatcgaccccacctacgagattggagacgaatacgccgacgagatc
aaactctcctcgttcggccgccgcgccgtgctgtcgctgcgccagaacctcgcctcgcgc
atcctcgatctggagaaggccagcctctacgaaaaatactcggagaaggtcggcgacatc
gtcacgggcgaggtctaccaggtgtggaaaaaggaggtgctgatcctcgacgacgaggag
aacgagctgatcctcccgaaggccgagcagatccccaacgacttctaccgcaagggcgac
acgatcaaggccatcgtcaagtcggtcgagatgaacaacaaccagccgcgcatcatcctc
tcgcgtacggccaaccagttcctcgaacggctgttcgagcaggaggttcccgagattttc
gacggtctgatcaccatcaagaagatcgtccgcatccccggcgagcgcgccaaggtcgcc
gtggagtcctacgacgagcgcatcgacccggtgggcgcctgcgtcggcatgaagggttcg
cgcatctactcgatcgtcaaggagctgcgcaacgagaacatcgacgtggtgaactacacg
gcaaacccgacgctgatgatccaacgttcgctcaatcccgcaaaggtgtcgtcgatcacc
atcgacgaggagaagatgaccgcttcggtctacctcaagcccgaccaggtgtcgctggcc
atcggcaagggaggtctcaacatccgcctctcgaaaatgctcaccggctatgacatcgac
gtttaccgcgaggtcgaggaggaggacgtggccctcacggagttcgccgacgagatcgac
ggatgggtgatcgacgccctgaaagccgccggatgcgacaccgccaagagcgtgctggaa
ctccccgtcgaggagatcgccgcacgcgccgaccttgaactggagcaggcgcagaaggtc
gtggagatcctgaaggccgaattcgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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