KEGG T02132: Aeqsu

Aequorivita sublithincola: Aeqsu_3115

Entry

Aeqsu_3115 CDS T02132

Definition

ATP-dependent DNA ligase LigD polymerase module,ATP-dependent DNA ligase LigD phosphoesterase module

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

asl Aequorivita sublithincola

Pathway

asl03410	Base excision repair
asl03420	Nucleotide excision repair
asl03430	Mismatch repair
asl03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:asl03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:asl03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:asl03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:asl03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S mRNA_cap_enzyme DNA_ligase_OB_2

Other DBs

NCBI-GI:

390955807

NCBI-GeneID:

13046508

UniProt:

I3YZY2

Position

complement(3385499..3387922)

AA seq 807 aa
MSLDKYIEKRKFDQTPEPKGVVNKENARRFVIQRHKASKLHYDLRLEMDGVLKSWAVPKG
PSMNASDKRLAIMTEDHPVGYLNFHGTIPKGNYGAGVMTIWDEGNYNVLLSEIGNDPVQQ
LEKGDLKIEFFGKKIKGTFALVHTKRGDKGNQWLLIKKKDEYSTDLEYDSEIFIENNNVK
SSESYRALDIQSFVKPMLASPAKKIFKDPEWVFELKWDGYRVLSNLFQNNVELYSRNGIS
YNEKFASIAKELKNIPHDCILDGEIVIIDKEGKNDFQKLQNYDDTIENLNLKYYVFDLLH
LNGMDTIALTLLERKSLLPELLNDLKNVFYCDHIQGMGPTLYNRALDAGMEGVIAKKADS
KYSPGYRSENWLKIKNSTTEEALICGYTDSVGGDTLFGSLILGQYNEEDLKYIGNCGSGF
SVTEQKELLAKFQKITIDESPFKEKINLKGRKPHWVKPFLVCEVKFSEKTKNGILRHPVY
KGIRQDKNVEEIVPQPIKEKKSFASNPSTLLDVNGISVPISNLEKVYWPEMGYTKYDLID
YYLNISDFILPYLKDRPQNLHRHPNGINGESFYQKDNDQLPNWVETTKIHSESSQKNIEY
LICQNQATLLYMANLGCIEINPWNSKINNLENPSYTVIDLDPSAENSFAEVIEVAQVAKE
VLDLFKIEGYCKTSGSSGIHIYLPLDELYSYQEARDFTKLLCYYIQERLPKLTSMERAVK
NRKGKIYLDYLQNRRGQTLASVYCVRPKVGATVSTPISWNELKKGLQLEDFTIKTVPKRL
EKIGDIFQGVLGQGINIENALGTISEK

NT seq 2424 nt +upstreamnt +downstreamnt
ttgagtttagataaatacatagaaaaaagaaagtttgatcagacgcctgaacccaaagga
gttgtaaataaggaaaatgcgagacgttttgttattcaacgtcataaagcttcaaaatta
cattacgatttaagattagaaatggatggagttttaaagagttgggctgttccaaaggga
ccttcaatgaatgcttctgacaaacgcttggccattatgaccgaggatcatcctgtaggt
tatttaaattttcatggcaccattcccaaaggaaattacggagcgggagtaatgacaatt
tgggacgagggaaattataatgtgttattaagtgaaataggaaatgacccagttcaacaa
ttagaaaaaggggatctgaaaatagaattctttggaaagaaaataaaaggaacatttgct
ctcgttcatactaaaagaggcgataaaggcaatcagtggctattgataaagaagaaggat
gaatattcaaccgatttagaatacgattctgaaatatttattgaaaacaataatgtaaaa
agttcagaaagttatagagctttagacattcagagctttgtaaagcctatgcttgccagt
cctgcaaagaaaattttcaaggatcctgaatgggtttttgaattaaagtgggatggatat
cgtgtactctcaaatctatttcaaaataatgtggaactatattcacgtaatggaatttca
tataatgagaaatttgcaagtattgcgaaggagttgaaaaatattccacacgattgcata
ttagatggagagatagttattatagacaaggaaggaaaaaacgattttcaaaaacttcag
aattatgatgataccattgaaaatttaaatttgaaatattatgttttcgacttacttcat
ctcaacggaatggatacaattgccttaaccctattagaacgtaaaagtctgttgcctgaa
ttattaaacgacctaaaaaacgtcttttactgcgatcatatccaaggaatggggccaaca
ttatataatcgtgcattggatgcaggaatggaaggggtaatagcgaagaaagcagattcc
aaatattctcccggatatagaagtgaaaattggttgaaaattaaaaatagcaccacggaa
gaagccttaatttgtggctacactgattctgtaggtggtgatacattattcggatcgctt
attttggggcaatataacgaagaagatttaaaatatatagggaattgtggttctggattt
tcagttacagaacaaaaggagttgttggcaaaatttcaaaaaattacaattgatgaaagt
ccatttaaagaaaaaataaatttaaaaggtagaaaaccacattgggtgaaaccattttta
gtttgtgaggtaaagttttcggagaaaactaaaaatggaattttgagacatcctgtctat
aaaggtataagacaagataaaaatgttgaagaaattgtccctcaacctattaaggaaaaa
aaatccttcgcttcaaatccttccacacttttagatgtaaatggaatatcggtaccaatt
tctaatttagagaaagtgtattggccagaaatgggttatacaaaatatgacttgatagat
tactacttaaatatttccgacttcatattaccgtatttgaaggatcgtcctcaaaattta
caccgccatcccaacggaattaatggagaatctttctatcaaaaggataacgatcagcta
ccaaactgggttgagacaactaaaattcattccgaatcttcccaaaaaaatattgaatat
ttaatttgtcaaaatcaagcaaccttactctatatggctaacttgggatgcatagaaata
aatccttggaattctaaaattaataatctcgaaaatccgagttatacggtaatcgatttg
gacccttcagctgaaaattcatttgctgaggtaattgaggtagcccaagttgctaaagaa
gttctggacttatttaaaattgaaggctattgcaaaacctctggctcctctggaattcat
atttatttgcctttggatgaactctatagttatcaggaagcaagagattttacaaaactg
ctttgctattacattcaagagcgtttgccaaaactaacaagtatggagagagctgtaaaa
aatagaaaaggaaaaatatatctagattacctgcaaaataggcgagggcagacattagct
tcagtatattgcgtgcgtcctaaagttggtgcaacagtttcaacgccgatatcttggaat
gaactgaaaaaaggtttacaattagaagattttactattaaaaccgttccaaagcgtctg
gaaaaaataggtgacatatttcaaggagtattagggcagggtatcaatatagaaaatgct
ttaggtacaatttctgaaaaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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