KEGG   Aequorivita sublithincola: Aeqsu_3118
Entry
Aeqsu_3118        CDS       T02132                                 
Name
(GenBank) DNA-directed DNA polymerase III PolC
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
asl  Aequorivita sublithincola
Pathway
asl03030  DNA replication
asl03430  Mismatch repair
asl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Aeqsu_3118
   03430 Mismatch repair
    Aeqsu_3118
   03440 Homologous recombination
    Aeqsu_3118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asl03032]
    Aeqsu_3118
   03400 DNA repair and recombination proteins [BR:asl03400]
    Aeqsu_3118
Enzymes [BR:asl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Aeqsu_3118
DNA replication proteins [BR:asl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Aeqsu_3118
DNA repair and recombination proteins [BR:asl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Aeqsu_3118
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP
Other DBs
NCBI-ProteinID: AFL82553
UniProt: I3YZY5
Position
3390089..3393079
AA seq 996 aa
MYLNCHSYYSLRYGTFSESTLLELAKENGITQLALTDINSTSACLSFIKQAQEHNIHSVV
GVDVRNGVDQLYILIAKNNEGFSEINTFISEHLHIKKLFPDVAPKFENCYCIYPFEKAME
IKSHTFSEYEFIGISIKNLNRLPFSPFNKMMDKLVIHQTVSFRNQSDYNAHRLLRTIDLN
TLLSKLPLSEQGDKTDVLLAPELVKVKYQEYPELLFNTDKLLKSCKVNFYFDEHRVNQNQ
IIYGEDKDSDYTILEELCYNKIKERYKNPKMEVYERVEKELAAIKQMDFVSYFLINNDIL
DYARSKDYPYIGRGSGANSVVAYIIGITNVDPIELDLYFERFINVYRSSPPDFDIDFSWK
DRDDITDYIFRRFKNTALMGTYVTFQYRAVIRELGKVFGVPKFEVDSFLKGYKVKKSASS
AYIQLIEKYAHYIHGFPNYLSVHSGGIIITQKPIYYYTSTFLPPKGFQTVQFDMNIAEEV
GIFKFDILAQRGLSKIKDTLEILAYNQPETDVLDMEDIEVFKNDPNINKLLNTGDCMGVF
YVESPAMRTLMTKLQTNDYLNLVAASSIIRPGVSNGGMKNEYILRHRIPEKRKEAHPVML
EILEDTYGVMVYQEDVLKVAHKFAGLSLAEADILRRGMGGKVKSKGQFEQIEKKFISYCL
KKGYSETLTNEVWNQIKAFAGYAFAKGHSASYAVESYQSLYLKKYFPLEFMTAVLNNGGG
FYNIETYIHEIKMQGGTVEAPCINKSDHGNKIYGEAVFLGLGMLKSLEFRAIQSILNERD
VYGKFSGFDDFVDRVKIGIEQIIILIRIDAFRFTGADKHTLLWEAHLKLDKNKTQNPYPV
LFKPKQITYDIPEIKSTTVIDAYDQIELLGFPLHSRFNLLAAPLPTDFKAKDMVAYVNRK
ITICGKLVTAKGTPTKDKRLMHFGTFYDSEGVFFDTVHFPNIAEKFSISSEGIYVVRGKV
VDDLGCLAIIVDYIQHLEMIPDPRFEDADKSVKLMD
NT seq 2991 nt   +upstreamnt  +downstreamnt
atgtatcttaattgccattcgtattattcgcttagatatggaactttttctgaaagcaca
cttttggaattggcgaaggaaaatggcattacacaacttgcacttacagatattaatagc
accagtgcttgcttaagctttattaaacaagctcaggaacacaatattcacagcgtagtt
ggagtggatgttcgtaatggtgtggatcaattatatattttgattgcgaagaacaatgag
gggttttcagaaataaataccttcatttcagaacatcttcatataaaaaagctattcccg
gatgttgcacccaaatttgaaaattgttattgtatctatccctttgaaaaggcgatggaa
attaagtcgcatactttttcagaatatgaatttatcggcatttcaattaaaaacctaaat
cgtttaccattttctcctttcaataaaatgatggataaattggttattcaccaaacggta
agttttagaaatcaatcagattataatgcgcaccgattgttgcggactatagatttaaat
acccttttaagtaaacttccgctctcggaacaaggtgataaaacggatgtgcttttagct
ccggaattggttaaagtgaaatatcaggagtatccagaattacttttcaatactgacaaa
ctactgaaatcctgcaaagtaaatttctattttgatgaacacagagtgaatcaaaatcaa
attatttatggggaagataaagattcagattacacaattttggaggagctgtgctataat
aaaatcaaggaacgctacaaaaatccaaaaatggaggtttatgaacgggtcgaaaaggaa
ttggcggccatcaagcaaatggattttgtttcctatttcctaataaacaacgatatttta
gattatgcccgttctaaagactatccatacattggtcgcggaagtggcgccaatagtgtt
gttgcgtatataattggcattacgaatgtagatcccattgaactggatctttattttgag
cggtttataaatgtgtaccgtagcagtccgccagatttcgatattgatttttcgtggaaa
gaccgagatgatattaccgattatattttcagaagatttaaaaataccgccttgatggga
acctatgtaacttttcaatatcgcgcggttattcgcgaattgggcaaagtgtttggggtt
ccaaaatttgaggtggacagttttctaaaaggctataaagtaaagaaaagcgccagtagt
gcttatattcaactgattgaaaaatatgcgcattatattcatggttttcctaattatctc
agcgtgcattccggcggaattataataacccaaaagccaatttattactatacaagtact
tttttgccaccaaagggttttcagaccgttcagtttgatatgaatatcgctgaagaagtt
ggcatttttaaattcgatattctcgcgcaacgcggactgtcgaaaattaaggatactttg
gaaatattagcatacaaccaacctgaaactgatgtgctggatatggaagatatagaggtt
tttaagaatgatcccaatataaataaattgcttaataccggagattgtatgggcgtgttt
tatgtggaatcgcccgcaatgcggactttgatgacgaaactacaaaccaacgattatctt
aaccttgtggctgcaagtagtattattagacctggcgttagtaacggcggaatgaaaaat
gaatatattctgcgccaccgaattcccgaaaagcgtaaagaagcgcatcctgttatgctc
gaaattttggaagatacctatggcgtaatggtttatcaggaagatgtgctaaaagtggcc
cacaaatttgccggactctccttggcagaagcagatattttaaggcgcggtatgggtggt
aaggtaaaatcgaaagggcaatttgagcagatagagaaaaagtttataagctattgctta
aagaaaggatattctgaaaccctcaccaacgaagtctggaaccaaataaaagcctttgcc
ggttatgcctttgcgaaaggtcattccgcatcttatgcggttgaaagctaccaatcgctc
tatctaaaaaaatattttcctttggaatttatgacggctgttttaaacaacggcggtggt
ttttataatattgaaacctatattcacgaaattaaaatgcagggcggcaccgtggaagca
ccttgcataaataaaagcgatcatggtaataaaatttatggcgaagccgtttttctaggt
cttggaatgttgaagtcattagagtttagggccattcaatctattttgaacgaacgggat
gtttacggtaaattttcgggttttgatgattttgtagatcgtgtgaagattggtattgaa
cagattataatattaattcgcatcgatgcatttcgatttactggagccgataagcatact
ttgctctgggaggcccatttaaagttggacaaaaacaaaacccaaaatccgtatcccgtt
ctttttaaacctaagcaaattacctacgatattcctgaaataaaatctacaacggttatt
gatgcatacgaccagattgaattattgggctttcccttacactcaagattcaatctttta
gctgcgcccttgcccacggattttaaggcgaaagatatggttgcatacgtaaatagaaaa
ataacaatctgcggaaagttggtaaccgccaaaggcacgccgacaaaagacaaacgctta
atgcacttcgggactttttacgatagtgagggcgtattttttgataccgtacacttcccg
aatattgcagaaaagtttagcataagctctgaaggtatttatgtggttcgcgggaaagtt
gtggacgatttgggatgtttggcgattattgtagattacatacaacatttagaaatgatt
ccagatccaagatttgaagatgcggataagagtgttaagttgatggattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (44)   

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