KEGG   Alligator sinensis (Chinese alligator): 102380702
Entry
102380702         CDS       T02922                                 
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
asn  Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:asn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:asn03009]
    102380702 (DDX55)
Enzymes [BR:asn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102380702 (DDX55)
Ribosome biogenesis [BR:asn03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    102380702 (DDX55)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII Helicase_C_2 AAA_22
Other DBs
NCBI-GeneID: 102380702
NCBI-ProteinID: XP_006015170
UniProt: A0A1U7RIV3
Position
Unknown
AA seq 554 aa
MSNKDVAAEAVTGSGKTLAFVIPVLEILLRREEKLKKTQVGAIIITPTRELAVQIDEVLS
HFTKHFPQFSQILLIGGTNPVEDIEKFKEHGGNIIVATPGRLEDMFRRKADGLDLARCVK
SLDVLVLDEADRLLDMGFEASINAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRI
SVKEKGVAASSTQKTPTRLENYYMICRADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYY
GKALESMVKNVKIMCIHGKMKHKRNRIFTEFRKLPSGILVCTDVMARGIDIPEVNWVLQY
DPPRSASAFVHRCGRTARIGHVGSALVFLLPMEESYVNFLSINQKCPMQEMKPSKNVVDL
LPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECSLIFRVKDLDFASLARGFALLRMPKM
PELKGKSFSDFIPVSFDTDTITFKDKNREKQRQKLLEQQRKEKQENEGKKKFIRNKAWSK
QKAKKEKKRKMTAKRKREEGSDLEDEDLEELLNDTRLLKRLKKGKISEEEFEKRLTGSER
KVEMEVVTDSESED
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgagcaacaaggacgtggctgcagaagcggtaacgggcagtggcaaaacgctggcgttt
gtgattcccgtgctagaaatccttctcagaagagaagaaaagttaaagaaaacgcaggtt
ggagccataatcattacgcccacaagagaattagctgtgcagattgatgaggtgctctca
catttcacaaaacattttccccagtttagtcagattctgttaatcggtggtacgaatcct
gtagaagatattgagaagttcaaagaacatggagggaacatcattgtagctacccccggc
cgtttggaggatatgttcagaagaaaagcagatgggctggatttagcacgttgtgtgaaa
tcacttgatgtgctggtattagatgaagctgacaggcttctagacatgggattcgaagca
agcataaatgccattctggactttttgcctaagcagagacggacaggtctgttctcagca
actcagactcaagaagttgagaatctggtgagagctggtctccggaatcctgtccgcata
tcagtgaaggagaagggagttgcagcaagcagcacccagaaaacccccacacggcttgag
aactactacatgatatgcagagcagatgaaaaattcaatcagttggtgcattttcttcga
caacacaagcaggaaaaacatctggtctttttcagtacctgtgcctgtgtggaatattat
gggaaggctctggagtccatggttaaaaatgtgaaaataatgtgcattcatgggaaaatg
aagcacaaacggaacaggattttcacagagtttcgtaaactcccaagtggcattttagtt
tgcaccgatgtgatggccaggggcatcgacattccagaagtaaattgggttttacagtat
gacccccctcgcagtgcaagtgcctttgtgcatcgctgcggtcgaacagctcgaattggc
catgtaggcagcgcacttgtatttttacttcccatggaagaatcctatgttaattttctc
tcaataaaccaaaagtgtcccatgcaggaaatgaaaccatcaaaaaacgtggtagatctt
cttccaaaactgaagtctatggctctggcagacagagcagtatttgagaaagggatgaaa
gcatttgtatcttatgtgcaggcctacgctaaacatgagtgcagtctcatcttccgagta
aaagatctggactttgcgagtcttgccagaggttttgctcttttgaggatgccaaagatg
cctgagttaaaaggaaagtccttttcggactttattccagtcagttttgacacggacacc
atcacattcaaagacaaaaacagagaaaagcagaggcagaaactgttagaacaacaaaga
aaggaaaaacaagaaaatgaagggaaaaagaaattcatacgaaataaagcctggtcaaag
cagaaagccaagaaggagaagaaaaggaaaatgacagctaaaaggaaaagagaagagggt
tctgaccttgaagatgaagacctggaggagctgctgaatgatacaagactcttgaaaaga
ttaaaaaagggtaaaattagtgaggaggagtttgagaagaggctgacgggcagtgagaga
aaagtcgaaatggaagtagtaactgactcagagtctgaagactga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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