KEGG   Aneurinibacillus soli: CB4_00229
Entry
CB4_00229         CDS       T05174                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
asoc  Aneurinibacillus soli
Pathway
asoc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:asoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CB4_00229 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asoc03021]
    CB4_00229 (rpoC)
   03400 DNA repair and recombination proteins [BR:asoc03400]
    CB4_00229 (rpoC)
Enzymes [BR:asoc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CB4_00229 (rpoC)
Transcription machinery [BR:asoc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CB4_00229 (rpoC)
DNA repair and recombination proteins [BR:asoc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CB4_00229 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Alpha-2-MRAP_N AP1AR
Other DBs
NCBI-ProteinID: BAU26127
UniProt: A0A0U5AYV4
Position
complement(187796..191437)
AA seq 1213 aa
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVTDAGETPLEKKQLLSEKEYRNYREKYGQAFTAQMGAEAIKKLLA
EIDLDKEVDFLKEELKSAQGQRRNRVIKRLEVLESFRNSGNFPDWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVSKGLAHNIKSAKRKVERVHPEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGTYYLTMENKESTGEGKVFSNPNQAIAAYANDHVTLHARIAIP
PTSLGKTSFTPEQINAPLMVTTVGKLIFNEILPPELPYINDPTKYNLQKQVPDKFFIFDK
GTNVKEFLENLPEHEAVKKGYLGTIISECFRRFGTTQTSVILDDIKANGFKFSTQAGITV
AVADIKTPEEKQQILADADAEVEVVQQQFRRGLITDNERYDRVISIWSKAKDRVTKVLMA
SLDKFNAINMMATSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLSVLEYFI
STHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTDKGVEAMAIRDGKEIIED
LYDRLVGRYSFQTLRHPETDEVMVGRNELIDENLADEIIAAGIEKVTIRSVIGCRTHHGV
CKKCYGRNLATGKNVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQE
LFEARNPKGQAVITEIDGEVVDMREGKDRREVEIRGETESKVYQIPYGSRLKVAIGRKVD
IGEELTEGSIDPKEMLKVRGMRGVQYYILQEVQKVYRMQGVEINDKHVEVMIRQMLRKVR
VIDSGETDLLPGAYVEIHEFEEANKKVLWEGRQPAVARSVLLGITKASLETDSFLSAASF
QETTRVLTDAAIKGKVDRLLGLKENVIIGKLVPAGTGMNRYRNIKLQHDLMPAEETVEQS
LVEEGAGLEEVSK
NT seq 3642 nt   +upstreamnt  +downstreamnt
ttgttagatgtcaataattttgaatatatgaagattggcctcgcatcaccggataaaatt
cgttcctggtcatacggtgaggtcaaaaaaccggaaaccattaactaccggacgttaaag
ccggaaaaagaaggcttgttctgcgagaaaattttcggaccgacaaaggactgggaatgt
cactgcggaaagtacaagcgtgtacgttataaaggcgtcgtctgcgaccgttgcggcgtt
gaagtgacgcgcgccaaagtacgtcgggagcgtatggggcacatcgaacttgctgcccct
gtctctcacatctggtatttcaaaggaattccgagccgtatgggccttgtgctcgatatg
tctccacgttccctcgaagaagtaatctacttcgcatcatacgttgtaaccgatgcaggg
gagacaccgcttgagaagaagcaacttctttctgagaaagaataccgcaactaccgtgag
aaatacggccaggcattcaccgctcagatgggtgcagaagcgatcaagaagcttctggct
gagattgatcttgataaagaagtagattttttgaaagaagagttgaaatcagcacaggga
cagcgtcgcaaccgtgtgatcaaacgtctcgaagtgctggagtccttccgtaattccggg
aacttcccggattggatggtacttgatgtactgccggttatcccgccggaactgcgcccg
atggttcagcttgatggtggacgttttgcaacgtctgacttgaacgacctgtaccgtcgt
gtaatcaaccggaacaaccgtcttaagcgtctgcttgatctcggcgctccagatatcatc
gtacaaaatgaaaagcgtatgctacaggaagcagtagatgcgctgattgataacggtcgc
cgtggccgtccggtaacaggaccgggtaaccgtccgctgaaatctctcagccatatgctg
aaaggtaagcagggtcgtttccgtcagaacttgctcggtaagcgtgttgactactctggt
cgttcggttatcgtagtaggtccgcacctcaaaatgtaccagtgcggtctgccgaaagaa
atggcacttgagctgtttaagccattcgtaatgaaagagcttgtcagcaaaggactcgca
cacaatatcaaatcagcgaagcgcaaagtagagcgcgtgcatccggaagtatgggatgtt
ctcgaggacgttatccgtgaacacccggttcttctcaaccgtgcccctacgcttcaccgt
cttggtattcaggcgttcgaaccaacacttgttgaaggacgtgcgatccgtctccacccg
cttgtatgtacagcgtacaacgctgacttcgatggtgaccagatggcggtacacgtgccg
ctctcagcagaagcacaggcagaagctcgtcttcttatgctggcagcacagaacatcctg
aacccgaaagacggtaagccagttgttacaccatctcaggatatggtactaggtacgtac
tatctgacgatggaaaataaagaatcaacaggtgaggggaaagtattctctaacccgaat
caggcgatcgctgcatatgcaaacgaccatgtaacgttgcatgctcgcattgctatacca
ccgacaagcctgggcaaaacatcctttacgccggagcagattaatgcgccgcttatggtt
acaaccgtagggaagctgatctttaatgaaatccttccacctgagctgccatacatcaat
gatccgacgaaatacaatctgcaaaaacaggttccggataagttctttattttcgataaa
ggaacgaacgtgaaggagttccttgaaaatctgccagaacatgaagccgtgaaaaaagga
tatcttggtacaattatttcagaatgtttccgtcgttttggaacgacacaaacatctgtt
attctcgatgacatcaaggcaaatggctttaagttctccacacaagcagggattacggta
gctgttgctgatattaaaacaccggaagagaagcagcagattctggctgatgccgatgca
gaagtagaagttgtgcagcagcagttccgccgtggtctcattacagataatgagcgctat
gaccgtgttattagcatctggagcaaagcgaaagaccgcgttacaaaagtgttgatggcg
tctctcgacaagttcaacgcgatcaacatgatggccacatccggtgcccgcggtaacgta
tcgcagattacacagcttgcaggtatgcgtggtctgatggcgaatccatctggtcgtatc
atcgagttgccaatcaaatcaaacttccgtgaaggtctgtctgtactcgaatacttcatc
tcgacgcacggtgcgcgtaaaggtctcgccgataccgccctgcgtacagctgactcgggt
tacctgacacgccgtctggtagacgttgcacaggacgtaatcgttcgggaagacgactgc
ggtacggataaaggtgtagaggcgatggcaattcgtgacggtaaagagatcattgaagat
ctgtatgaccgtctcgtaggtcgctattcattccagacattacgccatccagagacagat
gaagtcatggtaggccgtaatgagctgatcgatgagaacctagctgatgaaatcattgca
gcaggtatcgaaaaagtaaccattcgttcggttattggctgccgtacgcatcatggtgta
tgtaaaaaatgctatggccgtaacctcgccacaggtaaaaatgtggatgtcggcgaagct
gttggtattattgcagcccagtcgatcggggaaccaggtacacagctgacgatgcgtacc
ttccacaccggtggggttgccggagacgatatcacacagggtcttccgcgtattcaggag
cttttcgaagcgcgtaatcctaaaggtcaggctgtaatcacagagatcgatggggaagtt
gtcgacatgcgtgaaggcaaagaccgtcgtgaagttgaaatccgtggtgaaaccgaaagc
aaagtgtatcaaattccgtatggctcccgcttgaaagtagcaattggccgtaaggttgat
atcggggaagagctgacagaaggttcgattgacccgaaagaaatgctcaaagtccgtggc
atgcgtggcgttcaatactacatcctgcaggaagtacaaaaagtataccgtatgcagggg
gtagaaattaacgacaagcacgttgaggttatgatccgtcagatgctgcgcaaagttcgc
gtcatcgatagcggagaaaccgaccttctgccaggggcatatgtagaaattcatgagttt
gaagaagcgaacaagaaagtgctgtgggaaggcagacagccggctgttgcccgttcagtg
ctgcttggtattacgaaggcttcccttgaaacagattccttcctgtccgcagcttccttc
caggagacgacacgtgtcctgacagatgctgcaattaagggtaaggtagaccgtctcctt
ggtctgaaagagaatgttatcatcggtaaacttgttccagccggtacaggtatgaaccgt
taccgcaacatcaaactgcagcatgatcttatgccagcagaagaaactgttgaacagtct
ctagtagaagaaggagcaggacttgaggaagtatcaaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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