KEGG   Alteromonas stellipolaris LMG 21861: AVL57_12630
Entry
AVL57_12630       CDS       T04545                                 
Name
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
asq  Alteromonas stellipolaris LMG 21861
Pathway
asq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AVL57_12630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asq03400]
    AVL57_12630
Enzymes [BR:asq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AVL57_12630
DNA repair and recombination proteins [BR:asq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AVL57_12630
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AMJ74730
Position
complement(2680306..2683926)
AA seq 1206 aa
MLALYPSNKLEHLSFLLTTLIKHQPNGVFTPETILVESPGMQHWVSMQLAKEQGVAMNLD
FPLPVRFMWNTARLVLGKDKVPKQSPYRREVLAWRIDALLLEAAGKETSLQSTAAFEQVN
KYWLQAGSVQEQGVQRLQLATALADVYEQYLLYRPDWLFAWEENQRKTNDESEIWQSEIW
RHLSKQEPLHPARLHQLTLTALNSGDHLESGVSELPSRIVVFAINTMAPQLIAFFDALAV
HIDIHIFHLNPSVNYWGDAKSDSELARQLRMDGLEKWMQTNQSNPLLGNLGQQGRELFNL
LTDLDTFEVSAFDAPIPADSESGEILLLNQIHNDILEALPATPFTSIKSTDADPCENADD
SVTIMCTHSALREVQVLHDHLLHWLSQDASRTPSDVLVMCPAIENYAPFVDTVFHRVGTK
PLGGNGPVRLPCTIADRSPMDAEPLIAAYMTLLHLPDSRFGVSDIVDYLQLDAVQKRFSI
AQDDIDQMTVWLKQAHIHWGLDGSHKANVSAGATHENTYSWWWGIRRLLLGMLAPDSEGI
IDDMLTIPDVEGQSTVTLGKLIHVIELLGRFATELNTPRSPNAWGADLLALRDTCFTPTK
EQEHSWDLIAKVAADLAARCEEAGYTYDLSLRQVRELLLSRFSSPDAGNHFMTGQVTVCS
MLPMRSIPFKKVCILGLNDSEFPRKSTPLGLDLMAGPDRRVGDRSRRLEDRYLFLEAIIS
ARESLYLSYQGNDVKNNSERQPSLVLGEFLDMLDTGYQVNIGHYLKHAPLHPFSESAFTG
ALPSYETGWLRLAQSLRDAVSPAPETESSSIDGNKKGREGGKKGSEIQSSLAPLAVDSTP
ENTSFQCMQVARAFRDPLEFFSQQRLGVNLSQSFTLLDNSEPFETNALVRYQVLDAMFSS
SASFDDANAATLQHSDRVVQFAALRGDIPNNPVAQEELELWKESAVALTQAMGPHDAEPK
RAQFAGNHFTFTASALEGGSSLMQPCAGKVNDIRALGYFMTQLVFSASDDVTPHTQYPLD
IFYCDWVKGETKLMKRTFPAVDKNTARQVLLSIESLFVGILSAPTPAYSSLMSAVVSGTK
KSPGTLLANKVTLPIFLASLEANSKIDAEFEDGAQGGGIQFDSDTEDTEEVGKSLIPDIC
AFFASEDAQRILKNWLQSSGQFTADIASNPYVKWLFPDGVSWHDMPTTQAFLLFALVVNI
SSEEQL
NT seq 3621 nt   +upstreamnt  +downstreamnt
ttgctcgcgctttatccatcgaacaaacttgaacacctcagcttccttcttactacgcta
attaagcatcaacccaatggcgttttcacccctgaaaccatactggtagaaagcccaggc
atgcagcattgggtaagtatgcaacttgctaaagagcaaggcgtggcgatgaaccttgat
tttcctttaccagttcgctttatgtggaacacggcaaggttagtgttgggtaaagataaa
gtacctaagcagtcgccttaccgacgtgaagtgcttgcatggcgcattgatgcactttta
ctagaagcggcgggaaaagaaacatcgctacaatctacagcagcgttcgagcaggttaat
aaatactggttacaagcgggcagtgtgcaagagcaaggtgtacaacgactgcaattagca
accgcattagccgatgtgtacgagcagtatttgttatatcgtccagattggttgtttgcg
tgggaagaaaaccagcgcaaaacgaatgatgagtctgaaatttggcaaagtgaaatatgg
cgtcatctatccaagcaagaacctttgcacccagcaagactgcaccaacttacccttacc
gcgttaaatagcggcgatcatcttgaaagcggcgttagcgaattacccagccgtattgtg
gtgtttgctattaacaccatggcgccgcagttgattgcttttttcgatgcgttagcggtg
cacatcgatattcatatttttcatttgaaccccagtgttaattattggggcgatgcgaaa
agcgatagcgaactagcaaggcagctgcgcatggacgggctagagaaatggatgcagacg
aatcaaagtaacccgttattaggtaatttgggtcagcagggcagagagcttttcaatctg
ctcaccgatttagacacctttgaagtcagtgccttcgacgcgcccattccagctgacagt
gaaagcggtgaaatcttattactaaaccaaattcataacgatatattagaagcgttaccg
gctacgcctttcaccagtataaaaagcacagatgcagacccctgtgaaaacgctgatgac
agtgtgaccattatgtgtacccattcagcgctacgtgaagtacaggtgctgcacgatcat
ttactgcactggttatcgcaagatgcatcaagaacgccatctgatgtgctggtgatgtgc
cccgcgatagaaaactatgccccttttgtagacacggtatttcatcgggtgggaactaaa
ccgctaggaggcaatgggccagtgcgcttgccatgtactattgccgatagaagccccatg
gatgctgagcctcttattgccgcttacatgacactccttcatttgcctgatagtcgtttt
ggcgtatcagatattgtcgattacttgcaacttgatgcggtacaaaaacgctttagtatt
gcacaagatgatattgaccaaatgacagtatggcttaagcaagctcatattcactggggg
ttagacggcagccacaaagccaatgtatcggcaggagccacccatgaaaacacctacagc
tggtggtggggaattaggcgtttattgttaggtatgttagcgccagatagcgaaggtatt
atcgatgacatgcttaccattcccgatgtggaaggtcagtcgacggtaaccctaggtaag
ctaatccatgttattgagctacttggtagatttgccactgagcttaataccccacgaagc
ccgaatgcgtggggggccgatttattagcactgcgtgatacctgctttacccctaccaaa
gagcaagaacacagctgggaccttattgctaaagtggccgctgatttggcagctcgatgt
gaagaagcaggttatacctacgatttaagtttacgtcaggtgagggaattactgctaagt
cgtttctcatctcctgatgcaggtaaccactttatgacggggcaagtgacggtatgttcc
atgctgccaatgcgtagtatcccgtttaaaaaagtctgtatattagggcttaacgacagc
gagtttcctcgtaagtctacacccttaggtctcgatttaatggcggggcctgatagaaga
gtaggtgaccgttcccgtcgtttagaagacagatacctctttttagaagcgattatttcg
gccagagaaagcttgtatttaagctaccaaggtaacgatgtaaaaaataacagtgagcgc
caacctagcttagtgttaggtgaatttctggatatgttagacacgggctatcaggtaaac
attggccattatttaaagcatgcgccattacacccgttcagtgaaagcgcgtttactggc
gcactccccagctatgaaacgggctggttacgcctagcccaatcactacgtgatgctgtt
tcgcctgcccccgaaaccgaaagctctagcattgatggcaacaaaaaaggcagagaaggc
ggtaaaaaaggcagcgaaatacaaagttcactcgcgcctttagcggtagacagcacacct
gaaaacaccagctttcagtgtatgcaggtggcacgcgcgtttcgcgatccactagagttc
ttttcacagcagcgattaggggtaaacttatcccagtcattcaccttactagacaatagc
gaaccttttgaaacaaatgcgctagtacggtatcaagtactcgacgcaatgttttcttca
agtgcttcatttgatgatgcgaatgcggcaactcttcagcacagcgatagagtagttcaa
ttcgccgcgcttcgtggtgacattcctaataaccctgtagctcaagaagagctagagctg
tggaaggagagcgcggtagctcttacccaagcgatggggcctcatgatgccgaaccgaaa
agagcgcaatttgcaggcaaccactttacctttactgccagtgcgcttgaaggcggaagc
agcttaatgcagccgtgcgcaggtaaggtgaatgatataagagccttaggttactttatg
acccagcttgtgtttagtgcaagcgatgatgtaacaccccatactcaatatccgctagat
atcttttactgcgattgggtaaaaggtgaaactaagctaatgaagcgcacgtttccagca
gtggacaagaatactgcccgccaagttttgttaagtattgaatcattattcgttggcata
ttaagtgcccctacgccagcgtatagctcattaatgagtgctgtagtaagtggtactaag
aaatcacctggcacccttttggcaaacaaagtcaccttacccatatttctggctagcctt
gaggctaattcaaagattgatgctgaatttgaagacggtgctcaaggtggtggtattcaa
tttgatagtgataccgaagatacagaagaagtcggcaagtccctcatacctgatatatgc
gcattttttgccagtgaagatgcccagcgcatacttaaaaattggctacagtcatcgggg
caatttaccgctgatatcgcgagtaacccttatgttaaatggttatttcccgatggcgtg
agttggcatgatatgccaactacacaggcttttttattgtttgctttggtcgttaacatt
tcatcagaggagcagttatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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