KEGG   Archaeoglobus sulfaticallidus: Asulf_01568Help
Entry
Asulf_01568       CDS       T02642                                 

Definition
DNA polymerase LigD, ligase domain protein
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
ast  Archaeoglobus sulfaticallidus
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ast00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Asulf_01568
   03420 Nucleotide excision repair
    Asulf_01568
   03430 Mismatch repair
    Asulf_01568
   03450 Non-homologous end-joining
    Asulf_01568
Enzymes [BR:ast01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Asulf_01568
DNA repair and recombination proteins [BR:ast03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Asulf_01568
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1403743..1404738
Genome map
AA seq 331 aa AA seqDB search
MAAKDQITKDWFYKNIDPMLAVKGKPFSSSDYLYEIKWDGTRCIAFVDVDENRLRLQNRR
FLDIKYRYPEFRFHEQFSKSVVLDGEIVVLHNGRSDFRLLQKREQIENRAKIRILSSMYP
AVYVVFDILWDGEWIMDLPLIERKKILSELTDTAENLMISDYILGEGTEFYKKAIELGFE
GIMAKKLESPYILGRSDYWIKIKRKNTIDAVIIGYMSGEGVREQHFGSLLLGLYDGSDLI
YIGRVGTGFDSEFLEYFAKRIKKLVVDRLSIKNFEEIEMVRRDVGLIKPYYVAEVEFLEV
TNELKLRAPVFKRLRLDKDPKDCRIDQLRDG
NT seq 996 nt NT seq  +upstreamnt  +downstreamnt
atggctgccaaagaccagatcacaaaggactggttctataaaaatatagatccaatgctg
gcagttaagggaaaaccattcagcagttctgactatctgtatgagatcaagtgggatgga
acgagatgcatagcgtttgtggatgttgatgaaaaccgcctcaggctgcagaacaggaga
tttctggatataaaatacagatatcctgagttcagatttcacgaacagttttcaaagagt
gttgttctggatggtgaaatagttgtactgcataacggcaggtcggacttcagactcctc
caaaagagggagcaaattgagaacagagcgaagatcaggattctttccagcatgtatcct
gcagtatatgtggtcttcgacattctgtgggatggggaatggattatggatcttccgctg
atagagcgaaagaagatcctgtctgaacttacagatacagcggaaaatctaatgatttcg
gactacattcttggagaagggactgaattttacaaaaaagcaatcgaactcggctttgag
ggcataatggcgaaaaagcttgagagtccgtatatcttggggagaagtgattactggatc
aagattaaaaggaagaataccatagatgcggtgatcataggttatatgagtggtgagggc
gtgagagagcagcattttggctccctgcttctcggtctatatgatgggagtgacctgatc
tacataggcagggttggaacgggattcgattccgagttcttggaatattttgctaagaga
ataaaaaagctggttgttgataggcttagcatcaaaaacttcgaggagatcgaaatggta
aggagggatgtgggactcatcaaaccatactatgtcgccgaagttgaatttctggaagtt
acgaatgaactcaagttaagggctccggttttcaaaaggttaaggctggataaggatccg
aaggattgtagaatagatcagcttagggatggttga

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