KEGG T00558: Asuc

Actinobacillus succinogenes: Asuc_1268

Entry

Asuc_1268 CDS T00558

Gene name

uvrD

Definition

DNA-dependent helicase II

Orthology

K03657

DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]

Organism

asu Actinobacillus succinogenes

Pathway

asu03420	Nucleotide excision repair
asu03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:asu03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:asu03430]

SSDB

Motif

Pfam:

UvrD_C UvrD-helicase AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12 PhoH DEAD

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1412698..1414893

AA seq 731 aa
MDISELLDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLTQRIAWLIAVEGISEGSIMAV
TFTNKAAAEMRQRIESALARYSSQRLFGMWVGTFHSIAHRLLRAHYADAGLPQDFQILDS
EDQLRLVKRLLKLHNYDEKMYPAKQACWYINNKKDEGLRPQQIDDMNDRQEQEWIKIYRI
YQDTCNRAGLVDFAEILLRAYELFLHKPLILQNYQRRFGQILVDEFQDTNKIQYEWIRLL
AGKTGNVMIVGDDDQSIYGWRGAQIENIQKFLDDFSQAQTIRLEQNYRSTGNILQAANQL
ISHNSNRLGKDLWTEDDKGEPVGIYAAFNELDEALFVSSQIKIWLEDGGKLDECAVLYRS
NSQSRVLEEALIRAQIPYRIYGGMRFFERQEIKDALAYLRLVNNRHDDAAFERVVNTPTR
GIGERTLETLRQFTRERQITLWQATQIAIQENKLAGRAATALMRFVELINSLAQETEEMP
LFAQTDFVIKHSGLYQMYEQEKGEKGEVRIENLEELVSAAREFIKPEEADDMSDLTAFLT
HASLEAGEEQAGPHQSCVQMMTLHSAKGLEFPRVFMVGVEEGIFPSFMSLEEPGRLEEER
RLAYVGVTRAKKKLTICYAESRRLYGKEERHIPSRFINELPEECIRTVRLRGTVTRAYNR
LAVGQSAVNSGRVLRGDENEWKTGQKVRHAKFGQGTIINVEGTDNNTRLQIAFQGQGIKW
LIAHLAKLEKV

NT seq 2196 nt +upstreamnt +downstreamnt
atggatatttcagaattacttgacggcttgaacgacaaacagcgcgaagccgtcgccgcc
cctttaggcaattatttagttcttgccggggcggggtcgggcaagacgcgcgtattaact
cagcgaattgcctggttgattgctgtagaaggtatttccgaaggcagtattatggcggtc
accttcacgaataaagccgcagcggaaatgcgtcagcggattgaatccgcattagcccgg
tattcctcccagcgtttattcggtatgtgggtgggaacctttcacagcattgcacaccgc
ttattgcgcgctcattacgccgatgccggtttaccgcaggattttcagattttagacagt
gaagatcagttacgtttagtcaaacggttattaaaactacacaattatgacgaaaaaatg
tatccggcgaaacaggcctgttggtatatcaataataaaaaagacgagggattaagacct
cagcagattgacgatatgaacgatcgccaggaacaggaatggatcaaaatttaccgcatt
tatcaggacacctgcaatagagccggattggtggattttgccgaaatcctgttgcgcgct
tatgaactgtttttacataaaccgttgattctgcaaaattatcaacgtcgattcggacag
attctggtggatgaatttcaggataccaacaaaattcagtatgaatggattcgtttgctt
gccgggaaaacgggtaatgtcatgattgtgggcgatgacgaccaatctatttacggttgg
cgcggcgctcaaattgaaaatattcaaaaatttttagatgatttttcgcaggcgcaaact
attcgtctggagcaaaattaccgttccaccggtaatattctgcaggcggcgaatcaactg
atttctcataacagcaaccgtcttggtaaggatttgtggacggaagacgataaaggcgaa
ccggtgggcatttatgcggcctttaatgaactggacgaagccttatttgtgtcttcgcaa
attaaaatctggctggaagacggcggtaaactagacgaatgcgccgtgttgtaccgcagt
aacagtcaatcccgggtgctggaagaagcgctgattcgggcgcagattccgtatcgtatt
tatggcggtatgcgatttttcgaacgacaggaaatcaaggatgcgctggcatatttgcgg
ttggtcaataaccgccatgacgacgctgcatttgaacgcgtggtgaatacgccgacccga
ggtatcggcgaacgtacgctggaaaccttgcgtcaatttacccgagaacggcagattact
ttatggcaggccacccaaatcgccattcaggaaaataagctggcgggacgtgccgcgacc
gccttaatgcgttttgtggaattaatcaattccttagcgcaagaaacggaagaaatgccg
ctatttgctcaaacggattttgtgattaagcattccgggctgtatcaaatgtatgaacag
gagaaaggcgaaaaaggagaagtgcggatagaaaatctggaagaattggtatctgccgct
cgtgaatttattaagccggaagaagcggatgatatgtccgatttaaccgcgtttttaact
catgcttcgctggaagccggcgaggaacaggccggtccgcatcaatcctgtgtacagatg
atgaccttgcattcggcgaaagggctggagtttccgcgcgtgtttatggtgggtgtggaa
gaagggattttcccgagttttatgtctttggaagaacccggccgtttggaggaagagcgt
cgtctagcctatgtgggcgttactcgtgcaaagaaaaaactgaccatttgctatgcggaa
agccgtcgtttatacggtaaggaagaacgccatattccgtctcgtttcatcaatgaatta
ccggaagaatgtattcggacggtacgtttacgcggtacggtgacccgcgcttacaaccgg
ttggcagtcggacaaagtgcggtcaattccggacgtgtattgaggggcgatgagaacgaa
tggaaaaccggacagaaagtacgtcacgccaaattcggacagggaacgattatcaatgtg
gaaggaacggataacaatacgcgtctgcaaatcgcgttccaagggcagggcattaagtgg
ttgatagcccatttagcgaaactggaaaaagtttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ASU (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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