KEGG T00558: Asuc

Actinobacillus succinogenes: Asuc_1399

Entry

Asuc_1399         CDS       T00558

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

asu Actinobacillus succinogenes

Brite

KEGG Orthology (KO) [BR:asu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asu03032]
    Asuc_1399
   03400 DNA repair and recombination proteins [BR:asu03400]
    Asuc_1399
Enzymes [BR:asu01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Asuc_1399
DNA replication proteins [BR:asu03032]
Prokaryotic type
  DNA Topoisomerases
   Asuc_1399
DNA repair and recombination proteins [BR:asu03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Asuc_1399

SSDB

Motif

Pfam:

Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF zf-C4_Topoisom Toprim Zn_ribbon_recom Toprim_4 DUF4795 Toprim_2

Other DBs

NCBI-ProteinID:

ABR74758

UniProt:

A6VP61

Position

complement(1553851..1556463)

AA seq 870 aa
MSKSLVIVESPAKAKTINKYLGTNYVVKSSVGHIRDLPTAGASSGEKAKPISTKGLSVEE
KSRIKAEKERNALVKRMGIDPYHDWKANYQILPGKEKVVAELKSLAKKADHIYLATDLDR
EGEAIAWHLREVIGGDDSRFSRVVFNEITKNAIKQAFEKPEQLNIDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEFWEVAAELFTVHKAGI
RLDVTAFKGKKFAPKNAEQAQSAVDFLAKSDFIVSDLETKPTSSRPRPPFITSTLQQAAS
TRLGFSVKKTMMLAQRLYEAGYITYMRTDSTNLSRDALGMVRGYIEQNFGDSYLPPKPNF
YSSKENAQEAHEAIRPSDVNVSASHLSGMEKDAERLYDLIWRQFVACQMPAAQYDSTTLT
VSAGDYELKAKGRILRFDGWTKVLPQMGKNPEDQELPAVALQEKLELGSVQPTQHFTKPP
ARFTEAALVKELEKRGIGRPSTYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNQSF
AELMNYDFTAGMEDMLDQIANGTKDWKAELNQFFKDFSGQLSQAELDELEGGMKPNSIVP
TDIDCPACGRKMAIRTASTGVFLGCTGYALPPKERCKTTMNLIPESELLNVLDSETETKA
LMARKRCPKCGSAMDSYILDPHRKLHICGNNPNCDGYLVEEGAFKIKGYDGPVVACDKCG
ADMHLKLGRFGKYMACTNCDNTRRILKNGEVAQPKEEPIHFPELKCEKSDAYFVLRDGAS
GVFMSAHNFPKSRESRPAEVAELALYRERLPGKLQYLADAPPKDPDGNDAVIRFSRKEKR
QYVSSTDKNGKQTKWIVDFIDGKWIERSKK

NT seq 2613 nt +upstreamnt +downstreamnt
atgagcaaatccttggttattgtggaatcaccggccaaagcaaaaaccatcaataaatat
ctcggtactaactatgttgtaaaatccagtgtcggacatatccgcgatttacctactgcc
ggggcatcttcgggagaaaaggccaaaccgatttcaaccaaggggttaagcgtagaagaa
aaatccagaattaaagcggaaaaagaacggaacgccttggtaaaacgtatggggatagat
ccctatcacgactggaaggctaattaccaaattctgcccggtaaagaaaaagtagttgcc
gaacttaaatcccttgcaaaaaaagccgatcatatttatctcgctaccgatttggataga
gaaggagaggcgatagcctggcatttgcgtgaagtaatcggcggtgatgacagccggttc
agtcgcgtggtatttaatgaaattactaaaaatgccattaagcaggcgtttgaaaagccg
gaacagcttaatattgatcgcgttaatgctcaacaaacccgtcgctttttagatcgcgta
gtaggatttatggtttcgcctttattatggaaaaaagtggcgcgtggcttgtctgccgga
cgggttcagtctgtggcggtaaaattactggtggaacgggaacgggaaattaaagcgttc
caaccggaagaattctgggaggttgcagcggaattattcactgtgcataaagccggcatt
cgtcttgatgttactgcgtttaaaggtaaaaaatttgcaccgaaaaatgcggaacaagca
caaagtgcggtcgattttttagctaaatctgattttatcgtgtcggacttggaaaccaaa
cctaccagttcccgcccgcgcccgccgttcattacttcgaccttacagcaagccgccagt
accagattaggcttcagtgtgaagaaaaccatgatgttggcacaacgtttgtatgaagca
ggttatatcacctatatgcgtaccgattccaccaatttgagccgggatgctttgggtatg
gtacggggttatatcgaacaaaatttcggcgacagttatctcccgccgaaaccgaatttt
tattccagcaaagaaaatgcacaggaagcgcacgaagcgattaggccttccgatgtgaat
gtgtcggcttctcatttatccggtatggaaaaagatgccgaacgtttatatgatttaatt
tggcgtcagtttgtggcttgccaaatgcctgctgcgcaatatgacagtaccaccttaacg
gtttccgccggtgattacgagttgaaagccaaaggccgtattttacgctttgacggctgg
acaaaagtgttgccgcaaatgggaaaaaatccggaggatcaggaattgccggcagttgcg
ttgcaggaaaaattagaattgggcagcgtgcagccgacacagcatttcactaagccgccc
gcacgttttacggaagccgcactggttaaagagctggaaaaacgcggaatcggacgtcct
tcgacctatgccgccattatttctaccattcaggaacgcggttatgtgcgtaccgaaaat
cgccgtttttatgcggaaaaaatgggcgaaatagtgactgatcgtctgaatcagtctttt
gccgagctaatgaactatgattttaccgccggcatggaagacatgttagatcaaattgct
aacggaacaaaagattggaaagctgaattaaatcagttctttaaagatttttccggtcag
ttgagtcaagcggaattagatgaattggaaggcggcatgaaaccgaacagtattgtgccg
accgatattgattgtccggcctgtggacgtaaaatggccattcgtacagccagtaccggc
gtattcctcggctgtacgggctatgctttaccgcctaaagaacgttgtaaaaccacaatg
aatttaattcctgaatcggaattgctcaacgtattggacagtgaaaccgaaactaaagcg
ttaatggcgcgaaaacgttgtcctaaatgcggttcggctatggatagttatattttggat
ccgcaccgaaaactgcatatctgcgggaataatccgaattgcgacggctatcttgtagaa
gaaggggctttcaaaattaaaggttatgacggtccggtcgtggcatgtgataaatgtggt
gcggacatgcatttaaaactgggacgattcggtaaatatatggcatgtacaaattgcgat
aatacccgtaggattttgaaaaacggagaggtggcacagccaaaagaagaaccgattcat
ttcccggaattaaaatgtgaaaaatccgatgcgtatttcgtattacgcgacggcgcaagc
ggggtatttatgtctgctcacaattttccaaaatcacgggaatcgcgcccggctgaagtc
gcagagttggcattatatcgcgaacgattgccgggaaaattgcaatatctggccgatgcg
ccgccaaaagatccggacggcaacgatgctgtaatccgattcagccgtaaagaaaaacgt
caatatgtttcatcgacagataaaaacggcaagcaaaccaaatggattgttgattttatt
gatggaaaatggattgaacgcagtaaaaaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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