KEGG   Candidatus Arsenophonus lipoptenae: AUT07_00352
Entry
AUT07_00352       CDS       T04248                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
asy  Candidatus Arsenophonus lipoptenae
Brite
KEGG Orthology (KO) [BR:asy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asy03032]
    AUT07_00352 (gyrB)
   03400 DNA repair and recombination proteins [BR:asy03400]
    AUT07_00352 (gyrB)
Enzymes [BR:asy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AUT07_00352 (gyrB)
DNA replication proteins [BR:asy03032]
 Prokaryotic type
  DNA Topoisomerases
   AUT07_00352 (gyrB)
DNA repair and recombination proteins [BR:asy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AUT07_00352 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 DUF6865
Other DBs
NCBI-ProteinID: AMA64931
UniProt: A0A109QE40
Position
431994..434408
AA seq 804 aa
MSYIYNSSSIKILKGLDAVRKRPGMYIGDTEDGTGLHHMVFEVVDNSIDEALAGYCTKIV
VTIHTDNSISVIDNGRGIPTDLHEEEGISAAEVIMTVLHAGAKFDDNSYKVSGGLHGVGI
SVVNALSEKLYLIIKRDGKIHEQTYLLGIPQSSLKTIGHTNEFGTYIRFWPSLKIFKTIT
EFEYSILKKRLQELSFLNSGISISLIDKRDNKTNHFHYHGGIKAFVEYLNRNKNPIHSNI
FYFSSERNGVNVEISMQWNDSFQENVYCFTNNIPQKDGGTHLIGFRTAMTRTLNHYMDKE
GYQKKTKIIATGEDTREGLIAVISIKVPDPKFSSQTKDKLISSEVKNIVETLMNEKLIDY
LLENPNDAKIVVNKVIDAARARETARKIREMTRRKGILDLAGLPGKLADCQDRDPSTSEL
YLVEGDSAGGSAKQARNRKNQAILPLKGKILNVEKARFDKMLSSQEIAALITALGCGIGI
DEYNPNKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIKGGHLYIAQPPLYKIRNG
KKEIYIKDDECMREYLISIALENTTLYTSHQDLGLKGKPLEQLIAEYNSAQKIIKHLERI
YPLSLLNHLIYQPTLIIDDLKDQKKVENWINILVKRLTDHEKYGGSYNYYINKNNEHQVF
EPVLCIKTHEIKTYYNLDFDFFHGVEYTQITKISRLIKNLIKEGAYVERGEIRKSVTSFE
DVLNWLSKESRRGLIIQRYKGLGEMNSEQLWETTMDPNKRNMMQVTIKDAIQTDQLFTTL
MGDAVEPRRIFIEKNALKAENIDI
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtcatatatatataattcttcaagtattaagatattaaaaggtcttgatgccgtacgt
aaacgtccagggatgtatatcggagacactgaagatggcacaggactacatcatatggtt
ttcgaagtagttgataattctattgatgaagctttagcaggttattgtacaaaaattgtt
gtaacaatacatactgataattcaatatctgtaatcgacaatgggcgtggtattcctaca
gatctacatgaagaagaaggaatttctgctgcagaagtaataatgacagttctgcatgct
ggagctaaattcgacgataattcctataaagtttctggtggcttacatggcgtcggtatt
tctgttgttaatgctttatcagaaaaattatatttaattataaaacgtgatggaaagata
cacgaacaaacttatctattaggtattccacaatcatcgctaaaaactataggacataca
aatgaatttgggacatatattcgtttttggccaagtctaaaaatatttaaaactatcact
gaatttgaatatagtattttaaaaaaaagattacaggaactatctttccttaattcaggt
atatcaatcagtttaattgataaaagagataataaaacaaatcattttcattatcatggt
ggtattaaagcttttgtagagtatttaaatagaaataaaaatcctattcattctaatatt
ttttatttttcttcagaaagaaacggagtaaatgtagaaatatctatgcaatggaatgat
agctttcaagaaaacgtatattgttttacaaataatataccgcaaaaagatggagggaca
catcttataggttttcgaacagcaatgacacgtacgttaaatcattatatggacaaagaa
ggatatcaaaaaaaaacaaaaattattgctactggtgaagatacacgtgaaggattaatt
gctgtaatttcaattaaagttccagatccaaaattttcttcacaaacaaaagataaacta
atttcttcagaagtaaaaaatattgtagaaacattaatgaatgaaaaattgatagattat
ttattagaaaatcctaatgatgccaaaatagttgtgaataaagttatagatgctgcacgt
gcacgtgaaactgctcgtaaaatacgtgaaatgactcgtcgcaaaggaatactagactta
gctggattaccaggaaaactagctgattgtcaagatcgtgatcctagtacatcagaacta
tatttagtagaaggtgattctgctggtggatctgcaaaacaggctcgtaatcgaaaaaat
caagctattttaccattaaaaggtaaaatacttaatgtagaaaaagctcgttttgataag
atgttatcttctcaagaaattgctgctttaataacagctttaggatgtggtattgggata
gatgaatataatccaaataaattacgttaccataacattattatcatgactgatgcagat
gttgatggttctcatattagaacattattgttaactttcttttatcgtcagatgccggaa
attattaaaggaggacatctgtacattgcccagccacctttatacaaaataagaaatggt
aaaaaggaaatatatataaaagatgatgaatgtatgcgtgaatatttaatatcaatagca
ttagaaaatactacactttacactagtcatcaagatttaggattaaaaggcaaaccatta
gaacagctaatagctgaatataattcagcacaaaaaattataaaacatttagaacgtatc
tatccactttctttattaaatcatcttatttatcaacctactttaataatagatgattta
aaagatcaaaagaaagtagaaaattggattaacatcttagttaaacgtctaacagatcat
gaaaaatatggtggtagttataactactatattaataaaaataatgaacatcaagtgttt
gaacctgttttatgtattaaaactcatgaaattaaaacttattataatttagattttgat
ttttttcatggtgtagaatatactcaaatcacaaaaataagtagattaataaaaaacctt
attaaagaaggtgcttatgttgaaagaggtgaaattagaaaatctgtcacttcgtttgaa
gatgtattaaactggttatcaaaagagtctcgtcgaggactaataattcaacgttataaa
ggattaggagaaatgaattcggaacaattatgggaaacaacgatggacccaaataaaaga
aatatgatgcaagtcactattaaagacgctattcaaactgaccaactatttactacttta
atgggtgatgctgttgaaccacgtagaatttttattgaaaaaaatgcattaaaagcagaa
aatatagatatttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

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