KEGG   Agrobacterium tumefaciens S33: AWN88_11785
Entry
AWN88_11785       CDS       T04213                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ata  Agrobacterium tumefaciens S33
Pathway
ata03030  DNA replication
ata03430  Mismatch repair
ata03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ata00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWN88_11785
   03430 Mismatch repair
    AWN88_11785
   03440 Homologous recombination
    AWN88_11785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ata03032]
    AWN88_11785
   03400 DNA repair and recombination proteins [BR:ata03400]
    AWN88_11785
Enzymes [BR:ata01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AWN88_11785
DNA replication proteins [BR:ata03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AWN88_11785
DNA repair and recombination proteins [BR:ata03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AWN88_11785
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF655
Other DBs
NCBI-ProteinID: AMD58988
Position
linear:108547..112047
AA seq 1166 aa
MGDTVVRAETSDENLNTPGFVHLRVHSAYSLLEGALPLKKIMSKAVSDGQPAIAITDTNN
LFVALEFSEKARDEGLQPIIGCQLSIDMQDAAEDRRNHNSHLQKLPAIVLLAADAEGYER
LVDLVSRAYLEGEGSGHSVHITRAWLEEDSNAGLIALTGASGGPVDMALREGHAAQAKER
LLTLKSLFGDRLYIELQRQSGYDRSHERRMIGLAYDHDIPLVATNEAFFPSKADYEAHDA
LMAVAHNAIVSDDSRFRLTPDHYLKSREEMTALFADLPEALDNTVEIALRCSYVLKKRGP
ILPRFTGASDDPEAAERAEAEELRRQAVEGLDQRLAALGMAPGYTEQDYRERLDFELGVI
SRMKFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFL
NPERVSMPDFDIDFCQDRREEVIRYVQAKYGREQVAQIITFGSLQARAALRDVGRVLEMP
YGQVDKICKLVPNNPANPTPLSKAIEEEPRLQEEVDREPVVARLLDIAQKIEGLYRHAST
HAAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVESAGLVKFDFLGLKTLTVLKVAVD
FVAKRGIKVDLAAIPLDDAKTYEMLSRGETIGVFQVESAGMRKALIGMRPDCIEDIIALV
ALYRPGPMENIPVYNARKHGEEELESIHPTIDHLLKETQGVIVYQEQVMQIAQVLSGYSL
GEADLLRRAMGKKIKEEMDKQRERFVDGAIKNGVSKPQADTIFDLLAKFANYGFNKSHAA
AYAIVSYQTAYMKAHYPVEFLAASMTLDMANTEKLNDFRQDAGRLGIEIVAPSVQTSFRQ
FETGENRIYYSLAAIKGVGEGAVEHIVAIRGDKPFTSLEDFCLRIDPKQINRRVLESLIN
AGAFDCFGRDRAELIGGLDRIIGYAQMAQNNRTIGQSDMFGSGGGNGPEKLVLPAFQPWL
ASEKLLREYQVLGFYLTAHPLDTYRPVLEKLRVQNFADFSAAVKQGATAGRLAGTVTGKQ
ERKTRTGNKMGIVTFSDASGQYEAVLFSEGLGQYRDLLEVGKSLVITVQAEERPEGIGLR
IQTAQSLEEKSVQMQKALRVYVRDSGPLKTVARHLNTRGDGSVYFIVIKDEGSREIEVEL
TEKYRISPEIAAALRSAPGVVDVELV
NT seq 3501 nt   +upstreamnt  +downstreamnt
atgggcgatacggttgtgcgggcagaaacctctgacgaaaacctgaataccccgggtttc
gttcatcttcgggttcattccgcttactccctgcttgaaggggctctgcccctcaagaaa
atcatgtccaaggccgtttcagacggccagccggccattgccattacagataccaacaac
cttttcgttgcgctggagttttccgaaaaggcgcgggatgagggtttgcagcccatcatc
ggctgccagctgtcgatcgacatgcaggatgcggcggaggatcgccgcaaccacaacagc
caccttcagaaacttcccgctatcgttcttctcgccgccgatgccgaagggtatgagcgg
ctggtggatcttgtgagccgtgcctatcttgagggcgagggcagtggccattccgtgcac
attacccgcgcatggctggaagaggactcaaatgcgggcctgatcgcgctgaccggcgct
tccggcggcccggtggatatggccttgagggaaggtcatgccgcccaggcgaaggaacgg
ctgctgacactgaagtcactcttcggtgaccggctttatatcgaattgcagcgtcagtcc
gggtatgaccgttcgcatgagcggcgtatgatcggcctcgcttatgaccatgatattccg
ctggttgccacaaacgaggcgttcttcccgtcaaaggccgactacgaagcgcatgacgcg
ctgatggcggtggcgcataatgccattgtttcggacgacagccgctttcgcctgacgccc
gaccattacctcaaaagtcgagaagaaatgacggcgttgtttgcagacctgccggaggcg
ctggacaataccgtcgagattgcgttgcgctgctcttatgtgctgaagaagcgcgggcct
atcctgccacgtttcaccggcgccagcgatgatcctgaggcggcggaacgcgccgaagcg
gaagagcttcgacgtcaggcggtggaggggctggatcagcgccttgccgcgctcggtatg
gcgccaggttatacggaacaggattatcgcgagcggctcgatttcgagctcggcgtcatc
tcgcgcatgaagttccccggttatttcctgatcgttgccgacttcatcaaatgggccaag
cagcacgatatcccggtcggaccgggccgtggttcgggcgcgggttcgctcgtcgcttac
gcgctgacgattaccgatgtcgatccgctgcgtttctcactgctgttcgaacgcttcctt
aatcctgaacgcgtgtcgatgcccgacttcgacatcgatttctgccaggatcgtcgtgaa
gaagtgatccgctacgttcaggccaaatacggccgcgagcaggttgcgcagatcatcacc
ttcggttcgctccaggcgcgcgcggccctgcgcgacgtcggccgcgtgctggaaatgccc
tacgggcaggtggacaagatctgcaagctggtgcccaacaacccggccaacccgacgccg
ctttcgaaggcgatcgaggaggagccgcgcctgcaggaagaagtggacagggagcctgtt
gtcgcgcgcctgctggatatcgcccagaagatcgaggggctttatcgccacgcctcaacc
catgctgccggtatcgtcatcggcgaccggccgctgtcgaagctggtgccgatgtatcgc
gatccgcggtccgatatgccggtcacccagttcaacatgaagtgggttgaaagcgccggc
ctcgtcaaattcgactttcttggcctgaaaacgctgacggtgctgaaggtggccgtcgat
tttgtcgccaagcgcggcatcaaggtggatctcgccgccatcccgctcgatgacgccaag
acgtatgaaatgctgtcgcgcggtgagaccatcggcgtgttccaggtggaaagtgccggc
atgcgcaaggcgctgatcggcatgcggccggactgcattgaggacattatcgctctggtg
gcgctatatcgtcccggcccgatggagaacatccccgtttataacgcccgcaaacatggc
gaagaagagctggaatcgatccacccgaccatcgaccatctgctgaaggaaacacagggc
gttatcgtttatcaggaacaggtgatgcagatcgcccaggttctgtcgggttattcgctt
ggcgaagccgatcttctgcgccgagccatgggtaagaagatcaaggaggaaatggacaag
cagcgcgagcgcttcgttgatggcgccatcaagaacggtgtctcgaaaccgcaggccgac
accatcttcgatctcctcgcaaaattcgccaattacggcttcaacaagagccatgccgca
gcctacgcgattgtctcctaccagacggcctatatgaaggcgcattatccggtggagttc
ctggcggcctccatgacgctcgatatggccaatacggaaaagctcaacgatttccgtcag
gacgccggtcgtctcggcatcgaaatcgtagcaccgtccgtccagacctcgttccgccag
ttcgaaacgggcgagaaccgcatttattattcgttggctgccatcaagggtgttggcgaa
ggagcggtcgaacatatcgtggcgatccgcggcgacaagccgttcacgagcctcgaggat
ttctgcctgcgcatcgaccccaaacagattaaccgtcgtgtgctcgagagtctcatcaat
gccggtgctttcgattgtttcggccgcgaccgcgcagagttgatcggcgggctggaccgt
atcatcggttatgcccagatggcgcagaacaaccgcaccatcggccagtcggacatgttc
ggctcgggcggcggcaatggcccggaaaagctggtgcttcctgccttccagccctggctt
gcctcggaaaagctgctgcgcgaatatcaggttctcggtttctacctcacggcccacccg
ctggatacctatcgccccgtactggaaaaattgcgcgtgcagaatttcgccgatttttcc
gctgctgtgaaacagggagcgactgccgggcgtcttgccggcaccgttaccggcaaacag
gagcgaaagacgcgcaccggcaacaagatgggtatcgtcaccttctcggatgcttcaggg
caatatgaggcggtgttgttttccgaaggcctcggccagtaccgcgacctgcttgaggtc
ggcaagtcgttggtgatcacggtgcaggcggaagagcgccctgaaggtatcggtctgcgc
atccagacggcgcagtcgctggaagaaaaatccgtgcagatgcagaaggcactgcgtgtt
tatgtgcgtgattccggcccgctgaaaacggttgcccgccacctcaacaccaggggtgac
ggctcggtctatttcatcgttatcaaggatgagggtagccgcgagatcgaggtcgaactg
acggagaaataccgtatctcgcctgaaatagccgctgctcttcggtcagcccccggtgtc
gttgatgtggaactggtgtga

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