KEGG A.tumefaciens_C: AGR_C

Agrobacterium tumefaciens C58 (Cereon): AGR_C_1517

Entry

AGR_C_1517 CDS A.tumefaciens_C

Definition choline dehydrogenase (CHD)

Orthology K00108 choline dehydrogenase [EC:1.1.99.1]

Pathway atc00260 Glycine, serine and threonine metabolism

Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:atc00260]

SSDB

Motif Pfam: GMC_oxred_N GMC_oxred_C DAO FAD_binding_2 Thi4 Pyr_redox_2
Lycopene_cycl
PROSITE: GMC_OXRED_1 GMC_OXRED_2

Other DBs NCBI-GI: 15888170
NCBI-GeneID: 1138332
UniProt: Q8UH55

Position 828659..830410

AA seq 583 aa
MPISLLEGEMSGRTEGGEPQSNTFIGTEPPVEQTMQADYVIVGSGSAGSAIAYRLSEDGR
YSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPNLDNRRITAPRGKVIGGS
SSINGLVYVRGHAEDFNRWEELGAQGWAYADVLPYFKRMEHSHGGEEGWRGTDGPLHVQR
GPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEGFGLMEQTIHNGRRWSAANAYLKPALKR
GNVTLVNGFARKVIIENGRAVGVEIERRGRVETVKANREVIVSASSFNSPKLLMLSGIGP
AAHLKDMGIEVKADRPGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSK
GGLGASNQFEACAFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQAHVGYNLSKSR
GNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFRGPEIQPGENI
ETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVADSSIFPHVT
YGNLNGPSIMTGEKAADHILGKTPLPRSNQEPWVNPRAAVSDR

NT seq 1752 nt +upstreamnt +downstreamnt
ttgccgatctccctccttgagggggagatgtccggcaggacagaggggggtgagccccaa
tcgaatacattcatcggaaccgagcccccagtggagcaaacaatgcaagcagattacgtc
atcgtcggctccggctctgcgggctccgccatcgcctaccgcctgtcggaagacggccgt
tattctgtcatcgtcatcgaagctggcggttcggatttcggccccttcatccagatgccg
gcggcacttgcctggccgatgagcatgaagcgctacaattggggttatctctccgagccc
gagcccaatcttgacaaccgccgcatcactgcgccgcgcggcaaggtcatcggcggctcg
tcctccattaacggccttgtttacgttcgcggccatgccgaggatttcaaccgctgggag
gagcttggcgcgcagggctgggcctatgcggatgtgctgccctatttcaagcgaatggaa
cacagccacggcggcgaggaaggctggcgcggcacggatgggccgctgcatgtgcagcgc
gggccggtcagcaatccgctgttccacgccttcattcaggcgggcgcacaggcgggcttt
gaactgacggacgactataacggctccaaacaggaaggtttcggcctgatggagcagact
atccacaatggccgccgctggtccgccgccaatgcctatcttaaaccggcgctgaaacgc
ggcaacgtcacgctggtcaatgggtttgcccgcaaggtcatcatcgagaatggccgtgcc
gtcggcgtcgagatcgagcgcaggggtcgggttgaaaccgtaaaggccaatcgcgaggtc
atcgtttcggcctcctccttcaactcgccgaaactgctgatgctctcaggcatcggcccc
gccgcgcatctgaaagacatgggcatcgaggtgaaggcggatcgtcccggtgtcggggcc
aatcttcaggaccatatggagttttatttccagcaagtctccaccaagccggtctcgctt
tattcatggctgccatggttctggcagggggttgccggtgcacaatggctgctgtcgaaa
ggcgggctcggtgcctccaaccagttcgaggcctgcgccttcctgcgctccgcacccggt
ctgaaacagcctgacatccagtatcatttcctgcccgtcgccatctcttatgacggcaag
gcggcggcgaaaagccatggctttcaggcgcatgtcggttacaacctgtcgaaatcgcgc
ggcaacgtcaccctgcgctccgccgatccgcatgacgacccggtaatccgcttcaactac
atgagccacccggaagactgggaaaaattccgccattgcgtgcgcctgacgcgcgagatt
ttcggccagaaagccttcgacgattttcgcgggccggaaatccagccgggtgaaaacatc
gagacggacgaacagatcgacgcctttttgcgcgagcatctggaaagcgcctatcacccc
tgcggcacctgccggatgggagaccgcaacgaccccatggcggtcgtcgatccggaatgc
cgggtgatcggcgtggaggggctgcgggtcgccgacagctcgatcttcccgcatgtgacc
tacggcaacctcaacggcccgtcgatcatgaccggcgaaaaagcggctgatcacatcctt
ggcaaaaccccgctgccccgctccaatcaggagccgtgggtaaacccgcgtgcggccgtc
agcgaccgctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (7)   
   PROSITE (2)   
All databases (16)

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