KEGG T00041: AT1G03540

Arabidopsis thaliana (thale cress): AT1G03540

Entry

AT1G03540 CDS T00041

Definition

(RefSeq) Pentatricopeptide repeat (PPR-like) superfamily protein

Organism

ath Arabidopsis thaliana (thale cress)

SSDB

Motif

Pfam:

PPR PPR_2 PPR_1 PPR_3 PPR_long

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

MIPS:

TAIR:

Araport:

UniProt:

Position

AA seq 609 aa
MNLIILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPAT
PKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVF
DGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVR
LGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFS
KNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNV
VVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK
DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY
SKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD
EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGP
CAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKT
VGQSWIDAH

NT seq 1830 nt +upstreamnt +downstreamnt
atgaatctcatcatcctgaagcgccatttcagtcaacacgcctctttatgtctcacgccg
tcaatttcttcctctgctccgacgaaacaatcccggatcctggagctttgtaaattgggt
cagctcaccgaagccattcggatcctaaactcaacacactcgtctgagatccccgcaacg
ccaaagctttatgcctctctcttgcaaacatgcaacaaagtcttctcctttatccatggc
attcagtttcatgcccatgtcgtcaaatcgggtctggaaacggaccgaaacgttgggaac
agcttgctctctctgtacttcaagttgggacctggtatgagggagactcggagagttttc
gatggtagattcgtcaaagacgccatctcgtggacttcgatgatgtctggatacgttacc
ggtaaagaacacgttaaggcgcttgaggtgtttgtggagatggtgagttttggtttggat
gcgaatgagtttacgttgtcttcggcggttaaggcttgctctgagcttggagaagttagg
ctagggagatgtttccatggtgttgttattactcatgggttcgagtggaaccattttatc
tctagcacattggcgtatttgtacggtgtgaatagagaaccagtagatgcacgccgagtg
ttcgacgaaatgcctgagccagatgttatttgttggacagctgtgctttctgcgttttct
aagaacgacttgtacgaggaagctttgggacttttttatgcgatgcatagagggaaaggg
ttggtgcctgatgggtctacatttggaacggttttgactgcttgtggtaatctgaggagg
ctgaagcaagggaaagagattcatgggaagcttattacaaatgggataggtagcaatgtg
gtggtcgagagtagtcttcttgatatgtatggtaaatgtggatccgtacgggaggctagg
caagtgttcaatggaatgtctaagaaaaacagtgtttcttggtctgccttactcggggga
tactgtcagaatggagagcatgaaaaagcaattgagattttcagggagatggaagagaaa
gatctgtactgtttcggcactgttcttaaggcgtgtgctggtttggcggcagtgagactt
gggaaagaaattcatggccagtatgtgagaagagggtgttttggtaatgtgattgtagaa
tcggctttaattgacttgtatgggaaatccgggtgcattgattctgctagtcgtgtttac
tccaagatgtcaattaggaacatgataacgtggaacgcaatgctctctgcgcttgctcag
aatggaagaggtgaagaagctgttagtttcttcaatgatatggttaaaaaggggataaag
cctgactacatcagttttattgcgattcttactgcatgtggtcatacgggaatggttgac
gagggacggaattactttgtgttgatggctaagagttacgggattaaaccaggtactgag
cattacagttgcatgattgaccttctaggacgtgcaggtttgtttgaagaagcggagaat
ctgttggagagagcagagtgtagaaatgatgcgtctctgtggggagttctgcttggacct
tgtgctgcaaatgcagatgcctccagagttgcagagcggattgcaaagagaatgatggag
ttggaaccaaagtaccacatgagttatgtgcttctcagtaacatgtacaaggcgataggt
cgccatggtgatgcactcaatattcgtaagttaatggttagacgaggggtagcaaagact
gttggacagagctggattgatgctcactag

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (1)   
   ARAPORT (1)   
   MIPS (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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