KEGG T00041: AT1G15440

Arabidopsis thaliana (thale cress): AT1G15440

Entry

AT1G15440 CDS T00041

Gene name

PWP2

Definition

periodic tryptophan protein 2

Orthology

K14558

periodic tryptophan protein 2

Organism

ath Arabidopsis thaliana (thale cress)

Pathway

ath03008

Ribosome biogenesis in eukaryotes

Class

Genetic Information Processing; Translation; Ribosome biogenesis in eukaryotes [PATH:ath03008]

SSDB

Motif

Pfam:

WD40 Utp12 Nup160

Other DBs

NCBI-GI:

NCBI-GeneID:

MIPS:

TAIR:

UniProt:

Position

AA seq 900 aa
MEFRFENLLGAPYRGGNAVITKNTQLISPVGNRVSVTDLSKNHSVTLPLETSTNICRLAS
SPDGTFLLAVDEQNRCLFINLPRRVVLHRITFKDKVGALKFSPNGKFIAVGIGKLVEIWR
SPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSDYLLVGSRDLAARLFCVRKLKGVLNKP
FLFLGHRDSVVGCFFGVDKMTNKVNRAFTIARDGYIFSWGYTEKDVKMDESEDGHSEPPS
PVTPDRADEVMVENGGGVGTELKKRKEYDGKGLESDEEGDDDDEEYMHRGKWVLLRKDGC
NQASAKVTACDYHQGLDMVVVGFSNGVFGLYQMPDFICIHLLSISRQKLTTAVFNERGNW
LTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMS
GTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSL
TADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYT
VRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGR
RDIAGGRVMTDRRSAANSSSGKCFTTLCYSADGGYILAAGTSRYICMYDIADQVLLRRFQ
ISHNLSLDGVLDFLHSKKMTEAGPIDLIDDDNSDEEGGIDKQSRGNLGYDLPGSRPNRGR
PIIRTKSLSIAPTGRSFAAATTEGVLIFSIDDTFIFDPTDLDIDVTPEAVEAAIEEDEVS
RALALSMRLNEDSLIKKCIFAVAPADIKAVAISVRQKYLERLMEALVDLLENCPHLEFIL
HWCQEICKAHGSSIQRNYRTLLPALRSLQKAITRAHQDLADMCSSNEYTLRYLCSVPNNH

NT seq 2703 nt +upstreamnt +downstreamnt
atggagttccgtttcgagaatcttcttggcgctccttacagaggcgggaacgcagtcatc
actaagaatactcagctaatttcaccggttggtaatcgtgtctccgtcaccgacctaagt
aagaaccattcggtcactcttccgctcgaaacctctaccaacatatgtcgcctcgcttcc
tcacccgacggtactttcctactcgccgtcgatgaacaaaaccgatgccttttcatcaac
ttgcctcggcgggtagttcttcacagaattaccttcaaggataaagtcggtgccttgaag
ttcagccctaatggtaagtttatcgctgttggaattggtaagttggtggaaatatggcga
tcacctggtttcaggcgagctgttttgccctttgagcgggttaggacttttgctaattct
gatgataaagttgtctccttggagtggagcttggactctgattatttgcttgttggctca
agggatttagctgctaggttgttttgtgttagaaagttgaagggtgttttaaataagcca
tttttgtttctgggtcatagagattctgttgtgggttgcttctttggtgttgataaaatg
actaacaaggtcaacagggctttcacgattgcaagggatggttacatttttagttggggc
tatactgaaaaggatgtcaaaatggatgaatcagaagatggccactctgagccaccgtca
cctgttactccagatagggctgatgaggtgatggtggaaaatggtggtggtgttggtact
gagcttaagaaacgaaaagagtatgacggtaaaggtcttgaatcagatgaagaaggagat
gatgatgatgaagagtatatgcacagaggaaaatgggttttgttgaggaaggatgggtgt
aatcaggcatcagcaaaggtgaccgcttgcgactatcatcagggacttgacatggttgtg
gtggggttctcaaatggtgtttttgggctttatcagatgccagatttcatctgtatccat
ctgctctctatttctaggcagaagctaacaacagctgtcttcaatgagcgtggtaattgg
ctgacctttggttgcgcgaaacttgggcaactgttagtctgggattggcgaaccgaaacc
tatatactgaagcaacaaggacactattttgacgtcaactgtgtcacttactcaccggat
tcgcagctcttggcaactggtgctgatgataacaaagtcaaggtgtggaacgttatgtca
ggaacatgtttcattacattcaccgagcataccaatgccgtgactgctcttcattttatg
gctgacaaccactccctcttaagtgcatctctggacggcactgttcgtgcttgggatttt
aaaagatacaagaactataagacatacacaacccctacaccccgacaatttgtttcctta
acagcagacccgagtggtgacgtcgtctgtgctgggaccctagattcattcgagattttt
gtatggtccaagaagactgggcaaataaaggatattctgagtgggcatgaggctcctgtt
catgggttgatgttttctcccttaacgcaacttttagcttcatcctcatgggactataca
gttcggttgtgggatgtgtttgctagcaaaggcaccgtggaaacgtttcgacacaaccac
gatgttctaacagttgctttccgtcctgatgggaagcaattagcctcgagtacgctagat
gggcagatcaatttctgggacaccattgaaggtgtgttaatgtacaccatagaggggcgg
agagatatcgctggaggtcgggtcatgactgaccgtcggtctgcagctaattcaagttct
ggaaagtgttttacaacattgtgctattccgctgatggagggtatattctagccgcagga
actagcagatatatttgcatgtatgatatcgcagatcaggttcttctgcgccggtttcag
atatcccataatctttcgttagatggggttctggacttcttgcactctaagaagatgaca
gaagcaggaccaattgatctgatcgatgatgacaacagcgatgaagaaggtggcattgat
aaacagtcgagagggaatctgggttacgatctgcctggatccaggcctaaccgtggcagg
cccattatccggacaaaaagcctcagcattgccccaactggaaggagctttgctgctgca
acaacagaaggagtcctcatcttttcaattgacgataccttcatctttgatccgaccgat
ctagatatagatgttactccagaggctgttgaggctgccatagaagaggatgaagttagc
agagcacttgctctaagtatgcgtttgaacgaagatagccttatcaaaaaatgcatcttc
gctgtagcccctgcagacataaaagctgttgccatctctgtccgccagaaatacttagaa
aggcttatggaagctttggtggatctgcttgagaactgtcctcatctggagttcatactt
cactggtgtcaggaaatctgcaaggctcacggaagctccattcagcggaactacagaact
ctattgcctgcactgagatcgttgcagaaggcgatcaccagagcccatcaggatctggca
gatatgtgttcttccaatgagtacacgcttcgctacttgtgttctgttccaaacaatcat
tga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UniGene (1)   
   MIPS-ATH (1)   
   OC (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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