KEGG A.thaliana: AT1G27520

Arabidopsis thaliana (thale cress): AT1G27520

Entry

AT1G27520 CDS A.thaliana

Definition glycoside hydrolase family 47 protein

Orthology K10084 ER degradation enhancer, mannosidase alpha-like 1

Class Environmental Information Processing; Signaling Molecules and
Interaction; Glycan bindng proteins

SSDB

Motif Pfam: Glyco_hydro_47

Other DBs NCBI-GI: 18396373
NCBI-GeneID: 839643
MIPS: AT1G27520
TAIR: AT1G27520
UniProt: Q9SXC9

Position 1

AA seq 574 aa
MSCPIHPRRLFLCLLISLTFFVVDPSSQHIEVKKKQMREKVREMFYHAYDNYMTYAFPHD
ELKPLTKSFTDSLSELGNLKLEHLPTDYNGSAVTLVESLSSLAILGNSTEFEKGVLWLSE
NLTFDIDARVNLFECNIRVLGGLISAHLLAIDPNNRLIQGSYNNQLLRLAEDLGKRFLPA
FETPTGLPYAWINLKNGVMENETTETSTSGCGSLVLEMGALSRLTGDPRFESAALRALRQ
LWRMRSSLDLLGTTLDVVTGEWIEYSSSIGAGVDSFYEYLLKAYILFGKEDYWRMFHSAY
LASQKYFRHGPWYHEANMWSGKPTYWQLTSLQAFWPGLQVLVGDIAAANSSHREFFHVWE
KFGVLPERYLLDHQIIHPTMKYYPLRPELAESTFYLYQATKDPWYLDVGESMVKSLNLYT
KVPGGFASVRDVTTMQLEDHQHSFFLAETCKYLYLLFDDSFVAKRNYIFTTEGHPIQVVS
SWHEKLPETYFSGNWTLSKSGAWESRASALSLQVCPLISLNSRHPEQQRESACHVLDEQI
NHKCWSNKECGVDATTCRLRTCSGVGYCGLWNPL

NT seq 1725 nt +upstreamnt +downstreamnt
atgtcttgtcctatccatcctaggcgtctcttcctctgcttgcttatttctctcactttc
ttcgtcgtcgacccttcatcgcagcatatcgaggtcaagaagaaacaaatgcgagagaaa
gtacgcgagatgttctatcatgcgtatgacaattacatgacttatgcatttccgcatgat
gagctaaagcctctaactaaaagtttcacagactccctcagtgagcttggaaatcttaag
cttgaacacctgccaacagattataatggatcagctgttactcttgttgaatcattatcc
agccttgctatattggggaacagtacagaatttgaaaagggggttctctggctctcagaa
aatcttactttcgatattgatgcccgggtcaacctttttgagtgcaatataagagttctt
ggaggacttatctctgctcatcttcttgcaattgatccaaataataggttgattcagggt
tcctacaacaatcagcttcttcgattagctgaagaccttggaaaacgttttttacccgcg
tttgaaacacctacaggattaccatatgcatggattaatttgaagaatggagtaatggag
aatgagacaactgaaacaagcacttcaggatgtggttctctcgttcttgaaatgggagca
ttgtcacggctcactggtgacccgaggtttgaatcagctgcactacgtgcgcttcgtcag
ctatggaggatgcgaagttcgttagatctgcttgggacaacattggatgtggtaactggg
gaatggatagagtactcctctagcattggagctggggttgactctttctatgaatacctc
ttgaaggcttatattctttttggaaaagaagactactggcgaatgtttcattctgcttat
ctggcatctcagaagtacttcagacatgggccttggtaccatgaagctaatatgtggagt
ggaaaaccaacttactggcagctcacaagtcttcaggcgttttggcctggtctgcaggtt
cttgttggagatattgcagctgcaaattcatcgcatcgtgagtttttccatgtatgggaa
aagtttggtgtattacctgagaggtatctactcgatcatcaaataatacatccgacaatg
aagtactatccactacgtcctgaattagcagaatccacgttctacctttaccaagctaca
aaagatccatggtatctagatgttggtgaatcaatggtaaaatctcttaatctctacaca
aaggtgccagggggatttgcaagtgttagagatgtgacgaccatgcaattggaagatcat
cagcacagtttctttctcgctgaaacgtgcaagtacctatatctcctcttcgatgactca
tttgtggccaaaaggaattatatatttacaaccgagggccatcctatacaggttgtgagc
tcctggcatgagaaactaccagaaacttatttctcaggcaactggaccctttcaaagagt
ggagcatgggaaagtcgagctagcgcattgtcactacaagtctgtccactgatatctctt
aactctagacatcctgagcaacaaagagagagtgcttgccatgttcttgacgagcaaatc
aatcataagtgttggagcaacaaagagtgcggagttgatgccactacttgtagactaaga
acctgcagcggggttggatactgcggcttatggaatcccttataa

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UNIGENE (2)   
   MIPS-ATH (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (1)   
   IPI (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)

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