KEGG   Arabidopsis thaliana (thale cress): AT1G33420
Entry
AT1G33420         CDS       T00041                                 
Name
(RefSeq) RING/FYVE/PHD zinc finger superfamily protein
  KO
K26271  PHD finger protein MS1/MMD1
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ath03000]
    AT1G33420
Transcription factors [BR:ath03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    AT1G33420
SSDB
Motif
Pfam: PHD PHD_5 PHD_2 ASH2L-like_WH DUF6172 Vps39_2
Other DBs
NCBI-GeneID: 840235
NCBI-ProteinID: NP_564424
TAIR: AT1G33420
UniProt: Q9C810 A0A178W8G2
Structure
Position
1:complement(12120886..12123576)
AA seq 697 aa
MAVMNGGRATKRARRSNRISADLYDFSTFPTAEINGESTTLPPFRDGVRTFLATHARVTF
PPSTLFSSLMTWQIMLRPGDSTDGSDLSSKLVSLDVVEEDVTRSSRSVYCEHCCVVGWSS
HPVCRKRYRFIIRSGGDTKACTRCGNTQNLSEGSNCKWCSMALDIENWVYSQLEDNTHLL
HGVIHSNGYAHLLCLNGREGGSGFLTGRAIMDFWDRLCSSLAVRKASVMDVSRKYGMDYR
LLHGITRGCSWYSEWGYEFKSGSYALTKEAYQSAVDTLSAIPLSEFLFQGRKPRTQLHSI
ISFYQSLSCSELVTVKDLFSFLLQMIRENSSKPASKSSVLCAWSKSDVERVQQTMVKILK
ASGRPQANWVTRWALKRSICKSASPQLIDYCLKHFGGVLVDDGSRVVSSRCNPGSNDFEY
RLESVNNVHRLSNQDVNNASVEHVKQDLRYLYETLLHPQTMAEFRSRATREKMIDAATKI
LDCKHFIKDYLSSTVNPVAINLWCCVELSDELKESPAPPPERLVLPLNATVSDLKIEAAK
AFQEVYAMFKRFEVEELLGYGSIDDSITLKFLVGTNGVIRIKGRCSKHGLLRYRMERGVD
NWKVDCKCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELYSKKPKQ
SKKERGSSQVPKAGFVCRGESAAMGSGSNLSVTLRVG
NT seq 2094 nt   +upstreamnt  +downstreamnt
atggcggtgatgaacggtggtcgtgcgacgaagcgagcgaggcgtagcaacagaatctca
gctgatctttacgatttctctactttcccgacggcggagatcaacggcgagtcgacgact
ttgccgccgttccgagacggtgtgagaaccttcctcgcgacccacgcgcgtgtcactttc
cctccttcgacgctcttctcgagtttgatgacgtggcagatcatgcttagacctggagat
tcgacggacggttcagatctctcttctaaactcgtctctctcgacgttgtggaggaggat
gtgacgagatcctctagatctgtttactgtgaacactgctgtgtcgttggttggagtagt
catccagtgtgtagaaagaggtaccgcttcatcataaggtcaggaggagacactaaggct
tgcacgaggtgtggtaatactcagaatttgtctgaaggtagcaattgcaaatggtgcagc
atggctttagacattgaaaactgggtttactctcagctagaggataacactcacctcctt
cacggcgttatccactctaatggctacgctcatctactgtgtcttaatggaagagaaggt
ggctctggttttttgactggtcgtgccattatggacttctgggataggctttgttcctcc
cttgctgttcgaaaagctagtgtgatggatgtgtcaaggaagtatgggatggactaccgg
ttgcttcatgggattactagagggtgttcgtggtacagtgagtggggttatgaattcaaa
tcggggagctatgcactcaccaaagaagcttaccagagtgcagtggatactttatctgcg
attcctctctctgagtttttgttccaggggaggaaaccaagaactcagctccactccatt
attagcttctaccaatcactctcgtgttcagagcttgtgactgtcaaagacctcttctcc
tttctcctacagatgattcgtgagaacagttccaaacctgcatctaagtcgtctgtactg
tgtgcttggtctaaaagtgatgtggaacgtgtacagcaaaccatggttaagatactgaaa
gcttcaggacgcccacaagccaactgggttacaaggtgggctctcaagaggtctatttgc
aaatcagcctctccacaactgattgattactgtctcaagcattttggaggggttttggtg
gatgatggatctcgagtagtcagctcacgttgcaatcctggttcaaacgactttgagtac
aggcttgaatctgtcaacaatgtgcaccgcttatctaatcaagatgtaaataatgcatca
gtggagcatgtcaaacaggatttaagatatttgtatgaaactttattgcacccacaaacc
atggccgagtttaggtctcgagctacaagagaaaaaatgattgacgcagccacaaaaata
ctggactgtaagcatttcataaaagattacctgtctagcacagtgaaccccgttgcaatc
aacctctggtgctgtgttgagctttcggatgaactcaaagaatccccagcccctccacct
gaacggttggttttgccattgaacgctactgtttccgaccttaaaatcgaagctgctaag
gcttttcaggaagtgtatgcaatgttcaagaggtttgaagttgaggagctcctaggttac
ggttctatagatgactctattaccctgaaatttctagttggcacaaacggggtcatacgg
attaaagggagatgctcaaaacacgggctccttagataccgcatggagagaggggtggat
aattggaaagttgattgcaagtgtggcacaaaggatgatgatggcgagaggatgttggcc
tgtgatggatgtggtgtgtggcaccacactagatgtattgggatcaataacgctgatgcc
ctaccttccaagttcctttgtttcagatgcattgagttgtacagcaagaaaccaaagcaa
tctaaaaaagagcgtggatctagtcaagtgcccaaagctggctttgtttgtagaggtgag
tcagctgctatgggcagtggatctaatttatccgtaacacttagagtaggctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
3D Structure (1)   
   PDB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (48)   

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