KEGG T00041: AT1G54340

Arabidopsis thaliana (thale cress): AT1G54340

Entry

AT1G54340 CDS T00041

Gene name

ICDH

Definition

isocitrate dehydrogenase

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

ath Arabidopsis thaliana (thale cress)

Pathway

ath00020	Citrate cycle (TCA cycle)
ath00480	Glutathione metabolism
ath01100	Metabolic pathways
ath01110	Biosynthesis of secondary metabolites
ath01210	2-Oxocarboxylic acid metabolism
ath01230	Biosynthesis of amino acids
ath04146	Peroxisome

Module

ath_M00010

Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ath00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:ath00480]
Cellular Processes; Transport and catabolism; Peroxisome [PATH:ath04146]

SSDB

Motif

Pfam:

Iso_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

MIPS:

TAIR:

UniProt:

Position

AA seq 416 aa
MEFEKIKVINPVVEMDGDEMTRVIWKFIKDKLIFPFLELDIKYFDLGLPNRDFTDDKVTI
ETAEATLKYNVAIKCATITPDEARVREFGLKKMWRSPNGTIRNILNGTVFREPIICRNIP
RLVPGWTKPICIGRHAFGDQYRATDLIVNEPGKLKLVFEPSGSSQKTEFEVFNFTGGGVA
LAMYNTDESIRAFAESSMYTAYQKKWPLYLSTKNTILKIYDGRFKDIFQEVYEANWRSKY
EAAGIWYEHRLIDDMVAYAMKSEGGYVWACKNYDGDVQSDFLAQGYGSLGMMTSVLVCPD
GKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDSNAALLSYTEKL
EAACMGTVESGKMTKDLALLIHGAKVRRDQYVNTEEFIDAVAWELKRRLLGNNSRL

NT seq 1251 nt +upstreamnt +downstreamnt
atggaattcgagaagatcaaggtgatcaatcccgttgttgaaatggatggagacgaaatg
actcgagttatctggaaattcatcaaagacaagcttattttccctttcctggagctggat
atcaaatactttgatcttggactgcctaaccgcgatttcactgatgataaggttactata
gagactgctgaagctactttaaagtataatgtggctattaagtgtgcgacgattactccg
gatgaagctcgtgttagggagttcggcttaaagaaaatgtggaggagtcctaatggaact
ataaggaacattttaaacggcacagttttcagggaacctatcatttgcagaaacatccct
cgtcttgttccaggatggacgaagccaatctgtattggaaggcatgcttttggtgatcag
tatagagccactgatctcattgtcaatgaaccaggaaaactgaaactagtttttgagcca
agtggatcttctcagaaaacagaattcgaagtcttcaatttcaccggtggaggtgttgct
ttagccatgtataacactgatgagtctattcgtgcatttgctgagtcctcgatgtacaca
gcttaccagaaaaagtggccactttacctctccacaaaaaacaccatcctcaaaatatat
gatggaagattcaaggatatattccaagaagtttatgaagctaactggagatccaagtat
gaagcagcagggatatggtatgagcatcgtttgatagatgatatggttgcatatgccatg
aaaagtgaagggggttacgtctgggcatgcaagaattacgatggagatgtacagagcgat
ttcttagcccaaggatatggatctctgggaatgatgacttcggtgttggtttgtccagat
ggaaagaccattgaagcagaagcagctcatggcacagttacacgccactacagagttcac
cagaaaggtggtgaaacaagcaccaacagcatagcctctatttttgcttggtccagaggc
cttgcccacagggcaaagctggacagcaatgccgcactcttgagctatactgagaaacta
gaagcagcttgcatggggacggtggagtctggcaaaatgaccaaggatctagctcttctg
atccacggagccaaggttaggagggatcagtatgtgaatacggaagagttcattgatgcg
gtggcatgggagttaaaaagaagattgttaggcaacaactccaggttgtga

All links

Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UniGene (2)   
   MIPS-ATH (1)   
   OC (1)   
   TAIR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

Download RDF

DBGET integrated database retrieval system