KEGG   Arabidopsis thaliana (thale cress): AT1G77000
Entry
AT1G77000         CDS       T00041                                 
Symbol
SKP2B
Name
(RefSeq) RNI-like superfamily protein
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    AT1G77000 (SKP2B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT1G77000 (SKP2B)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     AT1G77000 (SKP2B)
SSDB
Motif
Pfam: LRR_6 LRR_4 F-box F-box-like LRR_8
Other DBs
NCBI-GeneID: 844036
NCBI-ProteinID: NP_565147
TAIR: AT1G77000
UniProt: O49286 A0A178WNL6
Position
1:28940147..28942639
AA seq 360 aa
MVSEGATRKELNLCFENMKMEGVLISEWKDIPVELLMKILNLVDDRTVIIASCICSGWRD
AVSLGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQ
DLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCV
EAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESV
VALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSLNIS
QCTYLTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLQSVHCACILQAHRTHTVYPHPAH
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggtgagtgaaggagcaacaagaaaagaacttaacctctgtttcgagaatatgaagatg
gaaggagttttgatctctgagtggaaagatatccctgtggagcttctcatgaagatttta
aaccttgttgatgatcggactgtgatcattgcttcttgtatttgtagtggctggagagat
gctgtttcccttggcctcactcgcctctccctctcttggtgcaagaagaatatgaacagt
ttggttctatctcttgctcccaaattcgtaaagcttcagactttagtactgcgacaggac
aaaccgcagcttgaggacaacgcggtggaagccatagcaaatcactgtcatgagctacaa
gatttggacttaagcaaaagctcgaaaatcactgaccattccctatattcacttgctcgt
ggttgtactaacctgactaaactcaaccttagcggctgcacttcgttcagcgacactgct
cttgcgcatttgacaagattttgcaggaagctcaaaattctgaatctttgtggttgtgtt
gaagctgtatctgacaatacattgcaggctattggagaaaactgcaatcagttgcagtca
ctaaacttgggatggtgtgagaatataagtgatgatggagttatgagtttagcttatggt
tgtcctgatttaagaactcttgatctttgtagctgtgttctaatcacagatgagagtgtt
gtggctttggcgaatcggtgcattcacttgaggtcattggggttatactactgcagaaac
attacagacagagcaatgtactctttagctcagagcggagtcaagaacaaacacgagatg
tggcgagcggtaaagaaaggaaaattcgatgaagaaggactaagaagccttaacattagt
caatgcacttacctaacaccttcagctgttcaagctgtctgtgatacattccctgctctc
cacacttgttcaggcagacattcacttgtcatgagcggttgtttgaatctacaatctgtt
cattgtgcttgtatccttcaagctcaccgcactcacaccgtttaccctcacccggcgcat
tga

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