KEGG   Arabidopsis thaliana (thale cress): AT1G80570
Entry
AT1G80570         CDS       T00041                                 
Name
(RefSeq) RNI-like superfamily protein
  KO
K10268  F-box and leucine-rich repeat protein 2/20
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT1G80570
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     AT1G80570
SSDB
Motif
Pfam: LRR_4 LRR_6 F-box-like F-box_5 F-box
Other DBs
NCBI-GeneID: 844396
NCBI-ProteinID: NP_974191
TAIR: AT1G80570
UniProt: Q3EC97
Position
1:30290325..30292420
AA seq 480 aa
MFIGIAYLGGDRQMDELPDHLVWDILSKLHTTDDRNSLSLSCKRFFSLDNEQRYSLRIGC
GLVPASDALLSLCRRFPNLSKVEIIYSGWMSKLGKQVDDQGLLVLTTNCHSLTDLTLSFC
TFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVASVEWL
EYFGKLETLEELCIKNCRAIGEGDLIKLRNSWRKLTSLQFEVDANYRYMKVYDQLDVERW
PKQLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKAS
HLRSISLRVPSDFTLPLLNNITLRLTDESLSAIAQHCSKLESFKISFSDGEFPSLFSFTL
QGIITLIQKCPVRELSLDHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQFP
SLNVLKLSKCLGVTDDGMRPLVGSHKLELLVVEDCPQVSRRGVHGAATSVSFKQDLSWMY
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgttcattgggattgcgtatcttggtggtgatagacaaatggatgaattgccagaccat
ttggtttgggacattctcagtaagcttcatactaccgatgacagaaactcgctttcactc
tcatgcaaacgtttcttctcgctggacaacgagcaaagatactctctgcggattggttgc
ggtttagttcctgcatccgatgcattgctttctctctgcaggaggtttccaaatctttcc
aaagtggagattatatactcaggctggatgtcaaaacttggcaaacaagttgacgatcaa
ggccttcttgtcctgaccacaaactgtcattctctcactgatctcactctgagcttctgc
accttcatcaccgatgttggcataggccatttgtcgtcgtgtccagagctttcttcgttg
aagttaaatttcgctcccaggatcactggttgtggtgtgttgtcacttgctgtaggatgc
aagaaactcaggagacttcatctcattcgatgcctaaacgttgcaagtgtagagtggttg
gagtatttcggaaagcttgagactttagaagaactctgtatcaagaactgcagagccatt
ggggaaggtgatttgatcaagctgaggaatagctggcgaaagctgacaagtctgcagttt
gaggtagatgccaattacaggtacatgaaggtttacgaccagttagatgtggaacggtgg
cccaaacagttggttccctgtgacagtctggtggagctcagcctcggtaactgcatcata
gctcctggtagagggctcgcttgtgtgctgagaaattgcaagaacctggagaagcttcat
ctggacatgtgtaccggtgtcagcgactcagacatcatagcattggttcagaaagctagt
cacctaagaagcatctcgctccgtgtcccgtccgattttactctgcctctcttaaacaac
atcacgttaagattaaccgatgaaagcctcagcgccatagctcaacactgctcaaagctc
gaatctttcaagatatctttctcagacggtgaattcccttccctcttctctttcacactc
caggggataatcactctgatccagaaatgcccagtacgcgagctttctcttgaccatgtg
tgtgtattcaacgacatggggatggaggctctatgttcagctcagaaacttgagatctta
gagcttgtccattgccaagaagtgagcgatgaggggttgattctggtgagccagtttcct
tctctcaatgtgttgaagttatcaaaatgtctgggagtgacagacgatggaatgagacca
cttgttggatctcacaagttggagttgcttgttgttgaagattgtcctcaggtttcaaga
agaggtgttcatggtgctgcaacgtctgtctcgtttaagcaagatttgtcatggatgtat
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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