KEGG T00041: AT2G22780

Arabidopsis thaliana (thale cress): AT2G22780

Entry

AT2G22780 CDS T00041

Gene name

PMDH1

Definition

malate dehydrogenase

Orthology

K00026

malate dehydrogenase [EC:1.1.1.37]

Organism

ath Arabidopsis thaliana (thale cress)

Pathway

ath00020	Citrate cycle (TCA cycle)
ath00620	Pyruvate metabolism
ath00630	Glyoxylate and dicarboxylate metabolism
ath00710	Carbon fixation in photosynthetic organisms
ath01100	Metabolic pathways
ath01110	Biosynthesis of secondary metabolites

Module

ath_M00012	Glyoxylate cycle
ath_M00168	CAM (Crassulacean acid metabolism), dark
ath_M00171	C4-dicarboxylic acid cycle, NAD+ -malic enzyme type

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:ath00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:ath00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:ath00630]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:ath00710]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C 3Beta_HSD Semialdhyde_dh NAD_binding_10 DapB_N

Other DBs

NCBI-GI:

NCBI-GeneID:

MIPS:

TAIR:

UniProt:

Position

AA seq 354 aa
MDPNQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAM
LMKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGV
PRKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFD
PKKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKE
IEYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHV
TELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK

NT seq 1065 nt +upstreamnt +downstreamnt
atggatccaaaccaacgtatcgcgagaatctctgctcatctcaatcctcctaatcttcat
aatcagattgctgacgggtcaggtttgaatcgggtggcttgtcgggcaaaaggtggatca
cccggattcaaagtggcgatacttggagcagctggtggaattggacaacctcttgcgatg
ttgatgaagatgaatcctttggtttcggttcttcatctctatgatgttgctaatgctcct
ggtgttactgctgatattagtcatatggatactagtgccgttgttcgtggatttctcggg
cagccgcagttagaggaagcacttacgggtatggatttagtgatcatacctgctggtgtt
ccgaggaaaccagggatgacgagggatgatctgtttaacattaatgctgggattgtgagg
acactctctgaagctatagctaaatgttgtcctaaagcaattgtgaatataatcagtaat
ccggtgaactccacggtgccaatcgcagctgaggttttcaagaaagctggaacctttgat
ccaaagaaactcatgggtgtcactatgcttgatgttgttagagctaatacctttgtggcg
gaagtaatgagtcttgatccccgtgaagttgaagttccggttgttggaggacacgcagga
gttacgattttaccactgctttcgcaggtgaaacctccttgctcgttcactcaaaaagag
attgaatatctcacagaccgcatccaaaacggtggcactgaagttgttgaggctaaagct
ggagcaggttctgcaacactatccatggcatatgcagcagtggagtttgcagatgcttgc
ctcaggggtctacgaggtgatgcaaacatcgttgagtgcgcatatgtggcatcccatgtg
actgagcttcccttcttcgcatcgaaggtgcgtctgggacgatgtgggatcgatgaagtg
tacggccttggaccattgaacgaatatgagaggatgggattagagaaggcaaagaaagag
ctttcagtaagtattcataaaggtgttacctttgcgaagaaataa

All links

Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (4)   
   UniGene (1)   
   MIPS-ATH (1)   
   OC (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (43)   

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