KEGG   Arabidopsis thaliana (thale cress): AT2G29630
Entry
AT2G29630         CDS       T00041                                 
Symbol
THIC
Name
(RefSeq) thiaminC
  KO
K03147  phosphomethylpyrimidine synthase [EC:4.1.99.17]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00730  Thiamine metabolism
ath01100  Metabolic pathways
ath01240  Biosynthesis of cofactors
Module
ath_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    AT2G29630 (THIC)
Enzymes [BR:ath01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.17  phosphomethylpyrimidine synthase
     AT2G29630 (THIC)
SSDB
Motif
Pfam: ThiC_Rad_SAM ThiC-associated
Other DBs
NCBI-GeneID: 817513
NCBI-ProteinID: NP_180524
TAIR: AT2G29630
UniProt: O82392
Structure
Position
2:12666935..12671055
AA seq 644 aa
MAASVHCTLMSVVCNNKNHSARPKLPNSSLLPGFDVVVQAAATRFKKETTTTRATLTFDP
PTTNSERAKQRKHTIDPSSPDFQPIPSFEECFPKSTKEHKEVVHEESGHVLKVPFRRVHL
SGGEPAFDNYDTSGPQNVNAHIGLAKLRKEWIDRREKLGTPRYTQMYYAKQGIITEEMLY
CATREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAVASSIEE
EVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAENLN
WEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRLTGIVSRGGSIHAKWCLAYHKENF
AYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVM
NEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTA
LLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKQHPHAQAWDDALSKARFEFRWMD
QFALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDIRKYAEENGYGSAEE
AIRQGMDAMSEEFNIAKKTISGEQHGEVGGEIYLPESYVKAAQK
NT seq 1935 nt   +upstreamnt  +downstreamnt
atggctgcttcagtacactgtaccttgatgtccgtcgtatgcaacaacaagaatcactct
gctcggccgaaacttccaaactcgtctttgttacctggattcgatgttgttgttcaagct
gctgctactcgattcaagaaggaaacaacaaccacaagagccactttgacgtttgatcca
ccaaccactaattctgagagagctaagcagagaaaacacaccattgatccttcttctcct
gattttcaaccaattccatcttttgaagaatgctttcctaagagcactaaagaacacaag
gaagttgtccatgaagaatctggtcatgttcttaaagttccctttcgtcgtgttcatttg
tctggtggtgagccagcttttgataattatgacactagtggtcctcaaaatgttaatgca
cacattgggcttgctaagctaaggaaggagtggattgatcgtcgggagaagctaggaaca
ccaagatacactcaaatgtactacgctaagcaagggatcataactgaggaaatgctctac
tgtgctactagggagaagctagaccctgagtttgtaagatcagaagttgcacgaggacgg
gcgattatcccttccaacaagaagcatttggagctggaaccgatgattgttggtagaaag
ttcttggtcaaggtcaatgcgaatatcggaaactctgctgttgccagctctattgaagag
gaagtctacaaggttcagtgggcaaccatgtggggagctgatacaatcatggatctctca
actggtcgtcacatccatgagacacgtgagtggatcctaaggaattcagctgtgcctgtt
ggtacggtgcctatttatcaagcacttgagaaagtggatggaattgctgagaatcttaac
tgggaggttttcagagagactctgattgaacaagctgagcaaggtgtagactatttcaca
atccatgctggagttttgctgcgttacattcccttaactgccaagcgtttgaccgggatc
gtttcgcgtggaggatccattcatgctaaatggtgcttagcttaccacaaggagaacttt
gcttacgagcactgggatgacattctagacatctgtaaccagtatgatgtggctctttcc
attggagatggtctgagacctggctccatttatgatgctaacgacactgctcagtttgca
gagctccttactcaaggtgaactaactcgccgagcgtgggaaaaagatgtgcaggtgatg
aatgaagggccagggcatgtcccaatgcacaagattccagagaatatgcagaagcagttg
gagtggtgtaacgaggcaccattctacacccttggtcctttgactactgatattgcccct
ggatatgatcacattacctctgccattggagctgccaatattggagccttgggtacagct
cttctttgctatgtaacaccaaaagaacaccttgggctaccaaacagggacgatgtgaag
gccggggttatagcatacaagatcgccgctcatgcagctgatctagccaaacagcatcca
catgctcaggcatgggacgatgcgctgagcaaagcgcggtttgagtttagatggatggac
caatttgctctgtcgttggaccccatgactgctatgtctttccatgatgaaactcttcca
gctgatggagccaaggttgcacacttttgctccatgtgtggaccaaaattctgctctatg
aagataacagaagacatccgaaagtatgcagaggagaatggttatggcagtgctgaagaa
gcaatcagacaaggaatggatgctatgagtgaagaattcaacatcgcaaagaaaaccatt
agcggagaacagcacggtgaagtaggtggagaaatatatttgccagagagctatgtcaaa
gctgctcagaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (3)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (2)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
3D Structure (6)   
   PDB (6)   
Protein domain (2)   
   Pfam (2)   
All databases (51)   

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