KEGG   Arabidopsis thaliana (thale cress): AT2G47030Help
Entry
AT2G47030         CDS       T00041                                 

Gene name
VGDH1
Definition
pectinesterase 4
Orthology
K01051  
pectinesterase [EC:3.1.1.11]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
Pentose and glucuronate interconversions
Starch and sucrose metabolism
Metabolic pathways
Module
Pectin degradation
Brite
KEGG Orthology (KO) [BR:ath00001]
 Metabolism
  Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    AT2G47030 (VGDH1)
   00500 Starch and sucrose metabolism
    AT2G47030 (VGDH1)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     AT2G47030 (VGDH1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
MIPS: 
TAIR: 
UniProt: 
Position
2
AA seq 588 aa AA seqDB search
MIGKVVVSVASILLIVGVAIGVVAFINKNGDANLSPQMKAVQGICQSTSDKASCVKTLEP
VKSEDPNKLIKAFMLATKDELTKSSNFTGQTEVNMGSSISPNNKAVLDYCKRVFMYALED
LATIIEEMGEDLSQIGSKIDQLKQWLIGVYNYQTDCLDDIEEDDLRKAIGEGIANSKILT
TNAIDIFHTVVSAMAKINNKVDDLKNMTGGIPTPGAPPVVDESPVADPDGPARRLLEDID
ETGIPTWVSGADRKLMAKAGRGRRGGRGGGARVRTNFVVAKDGSGQFKTVQQAVDACPEN
NRGRCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQ
VESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNC
VVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPD
RKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNR
GPGAFANRRVNWAKVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL
NT seq 1767 nt NT seq  +upstreamnt  +downstreamnt
atgattggaaaagttgtggtctcggtggcctccatcctcttaatagtcggagttgccata
ggagtcgttgccttcataaacaaaaatggcgatgctaatctgtctccccaaatgaaagcg
gttcaaggaatttgccagtcgacatccgacaaagcctcatgtgtcaaaactctcgagccg
gtcaagagcgaggacccaaacaagctgatcaaggctttcatgctcgctacaaaagacgaa
ttaaccaaatcgtctaacttcacgggtcaaaccgaagtaaacatgggctcgagcatctcg
ccaaacaacaaagccgttcttgattactgcaagagagttttcatgtacgctcttgaggat
ctcgctaccattattgaagaaatgggtgaagatcttagccagatcgggagcaaaatcgac
cagctcaaacaatggttaatcggtgtttacaattaccaaactgattgtcttgacgatatc
gaagaagatgatttaagaaaggcgattggtgagggcattgcaaactccaagattctcact
accaacgctattgacatcttccacactgtcgttagcgccatggccaagattaacaacaag
gttgacgacttgaagaacatgacaggcggaatccccactcccggagcccctcctgttgtt
gatgaatctcccgtggccgacccagatggtcctgctcgtcgtcttcttgaagacattgac
gagaccggaatcccaacatgggtttcaggtgctgacaggaagctcatggctaaggctgga
cgtggccgtagaggcggccgcggaggcggtgctagggtcagaacgaactttgtggtggct
aaggatggaagcggacagtttaagacggttcaacaagccgttgatgcttgtcctgagaat
aaccgaggccgatgcatcatctacatcaaggccggtctctacagagagcaagtaatcatc
cctaagaagaagaacaacatcttcatgtttggagatggtgcaagaaagaccgtcatttct
tacaacagaagtgttgctctcagccgtggaaccaccacatccctcagtgccacagttcag
gttgaatcggaaggattcatggcgaaatggatgggattcaagaacaccgccggtccaatg
ggacaccaagccgcggctatccgagtgaacggagaccgtgccgtgatcttcaactgcaga
ttcgacggttatcaagacacattgtacgttaacaacggtcgtcagttctacagaaactgt
gtggtctcgggaacagtagacttcatcttcggcaaatccgcaaccgtgatccaaaacaca
ctaattgttgtccgtaaaggaagcaagggacaatacaacacggtcacagccgatggaaac
gaattgggcttagggatgaaaattggtatcgtcctccaaaactgccgcatcgtgcccgac
aggaaactaacgccagagagacttacggtggcgacatacttgggaaggccgtggaagaaa
ttctcgaccaccgtgataatgagcaccgagatgggagatttgattagaccagaagggtgg
aagatttgggatggggaaagtttccacaagtcatgtaggtacgttgagtacaacaaccgt
ggaccaggagcattcgctaacagaagagttaactgggctaaggttgccaggtctgcagct
gaggtcaatggcttcacagctgctaactggttaggtcctattaactggattcaagaagcc
aatgttcctgtcacaattggattataa

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