KEGG   Arabidopsis thaliana (thale cress): AT3G11910Help
Entry
AT3G11910         CDS       T00041                                 

Gene name
UBP13
Definition
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
  KO
K11838  
ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
Enzymes [BR:ath01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     AT3G11910 (UBP13)
Peptidases [BR:ath01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   AT3G11910 (UBP13)
Ubiquitin system [BR:ath04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    AT3G11910 (UBP13)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
MIPS: 
TAIR: 
UniProt: 
Position
3
AA seq 1115 aa AA seqDB search
MTMMTPPPLDQQEDEEMLVPNPDLVEGPQPMEVAQTDPAATAVENPPPEDPPSLKFTWTI
PMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQFS
LAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAV
RKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTAS
IPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEG
DNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
EDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDV
KRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEH
LRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRIQ
KQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASNK
ANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKPM
DIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPLSI
EESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKLGLD
DPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIYKI
FPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQQVQNFGEPFFL
VIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDVYGA
WEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN
NT seq 3348 nt NT seq  +upstreamnt  +downstreamnt
atgactatgatgactccgccgccgctagatcagcaggaagacgaggagatgcttgttccg
aatccggatttggtcgagggacctcagcctatggaagttgcccaaactgatcctgctgct
accgctgtggagaatccaccacccgaggatcctccaagtctgaaattcacgtggaccatc
ccaatgttcactaggctcaataccaggaagcattactctgacgtatttgttgtaggcggt
tataagtggcgtatattgatttttcccaaaggaaacaatgtcgaccatttgtcaatgtac
ttggatgttgctgatgctgcgaatttgccgtacgggtggagcagatattcacagttcagt
ctggctgtagtgaatcaagtcaacaaccgatattccatcagaaaggagacgcaacatcaa
ttcaatgcaagagaaagcgactgggggtttacatcattcatgcctctcagcgagctctat
gaacccactcgaggatatttagtgaatgacactgttctgattgaagctgaagttgctgtg
cgtaaagttcttgattattggtcatatgactcaaaaaaagagacaggttttgttggacta
aaaaaccaaggtgctacctgttacatgaattctctcctgcagactttataccacatacct
tactttagaaaggctgtttaccacatgccaacgactgaaaatgatgcacctaccgctagt
atcccattggcgctccagagtttattttacaagcttcagtataatgataccagtgtagcg
acaaaggagctgacaaagtcgtttggttgggatacatatgattcttttatgcaacatgat
gtacaagaactcaacagagttctctgtgaaaagcttgaggacaagatgaagggaactgtt
gtggagggaacaatacaaaagctatttgaaggtcaccacatgaattacattgagtgcatt
aatgtagattacaaatctacacggaaagagtcattttatgacctccagcttgatgttaaa
ggctgcaaagatgtatatgcttcttttgacaagtatgttgaagttgaacgccttgaagga
gacaacaaataccatgcagaaggacatgatttgcaggatgcaaaaaaaggtgttctattc
atagactttccaccagttcttcaacttcagctcaagaggtttgaatacgattttatgagg
gacacaatggtgaagattaatgatcggtatgagtttcctctccaactggatctcgacaga
gaagatggaagatatttatcccctgatgcagacaagagtgtccgcaatctctacaccctc
cacagtgtcttggttcacagtggaggagtgcatggagggcattattatgcttttattagg
ccaacactttcagatcagtggtataaatttgacgatgaacgggtcacgaaagaagatgtc
aaaagagcactggaagagcaatatggtggtgaagaagagttaccgcagaataatcctggt
ttcaataatccacctttcaaattcacaaaatactcgaatgcatacatgcttgtttatatt
cgggaaagtgacaaggataagataatctgcaacgttgatgagaaagacattgcggaacat
ttgcgggtgaggctgaaaaaagaacaagaagaaaaggaagataaaagaaaatacaaggct
caagctcaccttttcacgacaatcaaggtcgcaagagatgatgacatcactgagcaaatt
ggaaagaatatatattttgatcttgttgatcatgaaaaagtgaggagttttcgaatccag
aaacagaccccctttcaacaatttaaggaagaggtagccaaagagtttggtgtcccggtt
caactacagcggttctggatctgggcaaagcgtcaaaaccatacttaccgccccaatcgt
cccctatcacctaatgaagaattacagacggttggacaaatacgagaggcatctaacaag
gcaaacaatgctgagctaaagctgtttttggaaatagagcgtggaccggatgaccttcct
attcctcccccagaaaaaacttctgaggatatccttcttttctttaaactctatgaccct
gagaacgcagtactaagatatgttggcaggctaatggtgaaaagttccagtaagcccatg
gatatagtagggcaattgaataaaatggctggttttgctcctgatgaggaaatagaactt
tttgaggaaataaagtttgaaccttgcgtaatgtgtgaacagattgataagaagacttct
ttcaggctgtgtcaaattgaagatggagatatcatttgttatcagaaacctctttctatc
gaggagagtgaatttcgatacccagatgtgccatcatttttggagtatgtacagaatcga
gagctggtgcgttttcgcacactggaaaaaccaaaagaggatgagtttactatggagctg
tcaaagctgcacacttatgatgatgtagtggaaagggtggctgagaagcttggccttgac
gatccatcaaaacttaggcttacatctcacaattgctactctcagcaacccaagcctcag
ccaatcaaataccgtggagtagatcatctttcagatatgttagttcactataatcagacg
tctgacatattgtattatgaagttttggatattcctcttccagaattgcaaggtcttaag
actctaaaagtagctttccatagtgccacaaaggatgaagtgataatccacaatatcaga
ctacctaagcagagtactgttggagatgttattaacgaactgaaaacaaaggtggagctt
tcgcatcaagatgcagaactgaggttacttgaggtctttttccacaagatctacaagatc
tttccatctactgaacgaattgaaaacatcaatgaccagtactggactttacgagcagag
gagatacctgaagaagagaagaatattggtcccaatgataggttaattcacgtatatcat
tttactaaagaggccggacaaaatcagcaagttcaaaattttggggaacccttctttttg
gtaatccacgaaggtgaaactttagaagaaatcaagacccgtatccaaaagaaactccat
gtccctgatgaggactttgccaagtggaagtttgcatcgttttcaatgggacgtcctgat
tacttgctggacacagatgttgtttataatcgctttcagagaagagatgtatacggtgcg
tgggagcagtatcttgggttggagcacattgataatgctcctaaaagggcttatgctgca
aatcagaaccgacacgcatacgagaagccggtgaaaatatacaattag

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