KEGG T00041: AT3G11910

Arabidopsis thaliana (thale cress): AT3G11910

Entry

AT3G11910 CDS T00041

Gene name

UBP13

Definition

ubiquitin carboxyl-terminal hydrolase 13

Orthology

K11838

ubiquitin carboxyl-terminal hydrolase 7 [EC:3.1.2.15]

Organism

ath Arabidopsis thaliana (thale cress)

Class

SSDB

Motif

Pfam:

USP7_ICP0_bdg USP7_C2 UCH UCH_1 MATH RA ubiquitin SASP

Other DBs

NCBI-GI:

NCBI-GeneID:

MIPS:

TAIR:

UniProt:

Position

AA seq 1114 aa
MTMMTPPPLDQEDEEMLVPNPDLVEGPQPMEVAQTDPAATAVENPPPEDPPSLKFTWTIP
MFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQFSL
AVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVR
KVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASI
PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGD
NKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRE
DGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVK
RALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHL
RVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRIQK
QTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASNKA
NNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKPMD
IVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPLSIE
ESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKLGLDD
PSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKT
LKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIYKIF
PSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQQVQNFGEPFFLV
IHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDVYGAW
EQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN

NT seq 3345 nt +upstreamnt +downstreamnt
atgactatgatgactccgccgccgctagatcaggaagacgaggagatgcttgttccgaat
ccggatttggtcgagggacctcagcctatggaagttgcccaaactgatcctgctgctacc
gctgtggagaatccaccacccgaggatcctccaagtctgaaattcacgtggaccatccca
atgttcactaggctcaataccaggaagcattactctgacgtatttgttgtaggcggttat
aagtggcgtatattgatttttcccaaaggaaacaatgtcgaccatttgtcaatgtacttg
gatgttgctgatgctgcgaatttgccgtacgggtggagcagatattcacagttcagtctg
gctgtagtgaatcaagtcaacaaccgatattccatcagaaaggagacgcaacatcaattc
aatgcaagagaaagcgactgggggtttacatcattcatgcctctcagcgagctctatgaa
cccactcgaggatatttagtgaatgacactgttctgattgaagctgaagttgctgtgcgt
aaagttcttgattattggtcatatgactcaaaaaaagagacaggttttgttggactaaaa
aaccaaggtgctacctgttacatgaattctctcctgcagactttataccacataccttac
tttagaaaggctgtttaccacatgccaacgactgaaaatgatgcacctaccgctagtatc
ccattggcgctccagagtttattttacaagcttcagtataatgataccagtgtagcgaca
aaggagctgacaaagtcgtttggttgggatacatatgattcttttatgcaacatgatgta
caagaactcaacagagttctctgtgaaaagcttgaggacaagatgaagggaactgttgtg
gagggaacaatacaaaagctatttgaaggtcaccacatgaattacattgagtgcattaat
gtagattacaaatctacacggaaagagtcattttatgacctccagcttgatgttaaaggc
tgcaaagatgtatatgcttcttttgacaagtatgttgaagttgaacgccttgaaggagac
aacaaataccatgcagaaggacatgatttgcaggatgcaaaaaaaggtgttctattcata
gactttccaccagttcttcaacttcagctcaagaggtttgaatacgattttatgagggac
acaatggtgaagattaatgatcggtatgagtttcctctccaactggatctcgacagagaa
gatggaagatatttatcccctgatgcagacaagagtgtccgcaatctctacaccctccac
agtgtcttggttcacagtggaggagtgcatggagggcattattatgcttttattaggcca
acactttcagatcagtggtataaatttgacgatgaacgggtcacgaaagaagatgtcaaa
agagcactggaagagcaatatggtggtgaagaagagttaccgcagaataatcctggtttc
aataatccacctttcaaattcacaaaatactcgaatgcatacatgcttgtttatattcgg
gaaagtgacaaggataagataatctgcaacgttgatgagaaagacattgcggaacatttg
cgggtgaggctgaaaaaagaacaagaagaaaaggaagataaaagaaaatacaaggctcaa
gctcaccttttcacgacaatcaaggtcgcaagagatgatgacatcactgagcaaattgga
aagaatatatattttgatcttgttgatcatgaaaaagtgaggagttttcgaatccagaaa
cagaccccctttcaacaatttaaggaagaggtagccaaagagtttggtgtcccggttcaa
ctacagcggttctggatctgggcaaagcgtcaaaaccatacttaccgccccaatcgtccc
ctatcacctaatgaagaattacagacggttggacaaatacgagaggcatctaacaaggca
aacaatgctgagctaaagctgtttttggaaatagagcgtggaccggatgaccttcctatt
cctcccccagaaaaaacttctgaggatatccttcttttctttaaactctatgaccctgag
aacgcagtactaagatatgttggcaggctaatggtgaaaagttccagtaagcccatggat
atagtagggcaattgaataaaatggctggttttgctcctgatgaggaaatagaacttttt
gaggaaataaagtttgaaccttgcgtaatgtgtgaacagattgataagaagacttctttc
aggctgtgtcaaattgaagatggagatatcatttgttatcagaaacctctttctatcgag
gagagtgaatttcgatacccagatgtgccatcatttttggagtatgtacagaatcgagag
ctggtgcgttttcgcacactggaaaaaccaaaagaggatgagtttactatggagctgtca
aagctgcacacttatgatgatgtagtggaaagggtggctgagaagcttggccttgacgat
ccatcaaaacttaggcttacatctcacaattgctactctcagcaacccaagcctcagcca
atcaaataccgtggagtagatcatctttcagatatgttagttcactataatcagacgtct
gacatattgtattatgaagttttggatattcctcttccagaattgcaaggtcttaagact
ctaaaagtagctttccatagtgccacaaaggatgaagtgataatccacaatatcagacta
cctaagcagagtactgttggagatgttattaacgaactgaaaacaaaggtggagctttcg
catcaagatgcagaactgaggttacttgaggtctttttccacaagatctacaagatcttt
ccatctactgaacgaattgaaaacatcaatgaccagtactggactttacgagcagaggag
atacctgaagaagagaagaatattggtcccaatgataggttaattcacgtatatcatttt
actaaagaggccggacaaaatcagcaagttcaaaattttggggaacccttctttttggta
atccacgaaggtgaaactttagaagaaatcaagacccgtatccaaaagaaactccatgtc
cctgatgaggactttgccaagtggaagtttgcatcgttttcaatgggacgtcctgattac
ttgctggacacagatgttgtttataatcgctttcagagaagagatgtatacggtgcgtgg
gagcagtatcttgggttggagcacattgataatgctcctaaaagggcttatgctgcaaat
cagaaccgacacgcatacgagaagccggtgaaaatatacaattag

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   MIPS-ATH (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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