KEGG   Arabidopsis thaliana (thale cress): AT4G21980
Entry
AT4G21980         CDS       T00041                                 
Symbol
APG8A
Name
(RefSeq) Ubiquitin-like superfamily protein
  KO
K08341  GABA(A) receptor-associated protein
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    AT4G21980 (APG8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT4G21980 (APG8A)
   04121 Ubiquitin system [BR:ath04121]
    AT4G21980 (APG8A)
   03029 Mitochondrial biogenesis [BR:ath03029]
    AT4G21980 (APG8A)
Membrane trafficking [BR:ath04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    AT4G21980 (APG8A)
Ubiquitin system [BR:ath04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   AT4G21980 (APG8A)
Mitochondrial biogenesis [BR:ath03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    AT4G21980 (APG8A)
SSDB
Motif
Pfam: ATG8 APG12
Other DBs
NCBI-GeneID: 828287
NCBI-ProteinID: NP_567642
TAIR: AT4G21980
UniProt: Q8LEM4 A0A178UVA3
Position
4:11655562..11657034
AA seq 122 aa
MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGSLT
VA
NT seq 369 nt   +upstreamnt  +downstreamnt
atggctaagagttccttcaagatctctaaccctctcgaggcaaggatgagtgaatcttct
cgaatcagagagaagtaccctgacagaattcccgtgattgtggagaaggctggacaaagt
gatgttcctgacattgacaagaagaagtatcttgtaccagctgatctaacagtgggacaa
tttgtatacgtggttcgtaaaagaatcaagcttggagctgagaaagctatttttgtcttt
gttaagaacacattgcctccaactgctgcattgatgtctgcgatctatgaagaacacaaa
gatgaggatgggttcctctacatgacttacagtggagagaacacttttggatctcttacc
gttgcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

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