KEGG   Arabidopsis thaliana (thale cress): AT4G22090
Entry
AT4G22090         CDS       T00041                                 
Name
(RefSeq) Pectin lyase-like superfamily protein
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00040  Pentose and glucuronate interconversions
ath01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    AT4G22090
Enzymes [BR:ath01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     AT4G22090
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 828298
NCBI-ProteinID: NP_193940
TAIR: AT4G22090
UniProt: O65457
Position
4:complement(11704003..11706042)
AA seq 394 aa
MTHFTVSCLLVALFLCQSLVHAAYNGYYGYSPAAAPYPAEEPQNIMNPVDSCWRLKSDWD
VNREDLADCAVGFGSSTLGGKKGNIYVVTNPYDNAQNPHPGSLRYGVIQAKPLWITFAKD
MVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKSGKVRS
SPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVIHASTAITISNNYFTQHDK
VMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSA
DPTIFSEGNYFIASDKSYSKEVTKREVKGGWNNWRWRTSNDVFKNGAFFVPSGYGSIPLP
YSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPCY
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgactcatttcaccgtttcgtgcctcctcgtggcactattcttatgtcagtccttggtc
catgccgcatataacggttattacgggtatagccccgcggctgcaccctaccccgccgaa
gaacctcagaacatcatgaatccggtggactcctgttggcggctcaagtctgactgggat
gtcaatcgtgaagacctagcagattgcgcggttgggtttggttcatctaccttgggtggc
aagaaaggtaatatatatgttgtcacaaacccttacgacaatgcacaaaacccccaccca
ggttctttgcggtacggcgtgatccaagccaagccattgtggattactttcgctaaggat
atggtcataaccctagcgaatgagctcatggtcaatagctataagaccatagatgggcga
ggggcaaaagtagaaattgcatacggaccatgcatcacgatacaagacgtgacgaacgtc
attgtgcatgggatcagtatccacgactgcaaaccagggaaatctggaaaggtgaggagc
agcccgacgcatgtcggtcaccgtaagggatcggacggtgatgccatcactatttttggt
tcgtcgaatgtttggatcgatcattgttacctagcgagttgtacggacggactcatcgat
gtaatccatgcttccacggcaatcactatttccaacaactatttcactcagcatgacaaa
gtgatgttgctcggacacaacgataattttgtgaaagatgtgaaaatgaaagtgaccgtg
gcattcaatcattttggaccaggacttgtggagagaatgccaagggtaagacgaggctac
gctcatgtggcaaacaatagatacgataaatggataatgtatgcaattggtggtagcgcc
gatcccaccattttcagtgaaggcaactatttcattgcttctgataaatcttacagcaaa
gaggtgacgaagagagaagtaaaaggaggatggaacaattggagatggagaacctcaaac
gatgttttcaagaacggagctttcttcgtaccttctggttatggcagcattccgctaccg
tacagttctgctcagcgattcacagtcgctcccggaaacttggttccttctttaaccgca
gacgctggccctctaaactgcaaccgcaacggtccttgttattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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