KEGG   Arabidopsis thaliana (thale cress): AT4G34210Help
Entry
AT4G34210         CDS       T00041                                 

Gene name
SK11
Definition
(RefSeq) SKP1-like 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04120  Ubiquitin mediated proteolysis
ath04141  Protein processing in endoplasmic reticulum
Module
ath_M00381  SCF-SKP2 complex
Brite
KEGG Orthology (KO) [BR:ath00001]
 Genetic Information Processing
  Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AT4G34210 (SK11)
   04120 Ubiquitin mediated proteolysis
    AT4G34210 (SK11)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     AT4G34210 (SK11)
   Cul7 complex
     AT4G34210 (SK11)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic Type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     AT4G34210 (SK11)
  Centrosome formation and ciliogenesis proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     AT4G34210 (SK11)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Skp1 Skp1_POZ Peptidase_C30
Motif
Other DBs
NCBI-GeneID: 829569
NCBI-ProteinID: NP_567959
MIPS: AT4G34210.1
TAIR: AT4G34210
Araport: AT4G34210
UniProt: O49484
Position
4
AA seq 152 aa AA seqDB search
MSSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCK
KHHVDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGK
TPEEIRSTFNIENDFTPEEEEAVRKENQWAFE
NT seq 459 nt NT seq  +upstreamnt  +downstreamnt
atgtcttcgaagatgatcgtgttgatgagctccgatggtcagtcgtttgaggtggaagaa
gcggtagcaatccaatcgcagaccatagcgcatatggttgaagacgattgcgttgctgat
ggaatccctcttgcaaacgtggaaagcaagattcttgtgaaagtgatcgagtactgcaag
aaacaccacgtcgacgaggctaatcctatctctgaagaggatctcaacaactgggacgag
aagttcatggatctcgaacaatccaccatctttgaactcatccttgctgcgaattacctc
aacataaaaagcttgcttgatctcacatgccaaactgttgcggacatgatcaaaggcaag
actccagaggagattcgttcaactttcaacattgagaatgattttacacctgaggaagaa
gaagctgttcgtaaggagaatcaatgggcttttgaatga

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