KEGG   Arabidopsis thaliana (thale cress): AT4G39370Help
Entry
AT4G39370         CDS       T00041                                 

Gene name
UBP27
Definition
ubiquitin carboxyl-terminal hydrolase 27
Orthology
K11851  
ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
Enzymes [BR:ath01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     AT4G39370 (UBP27)
Peptidases [BR:ath01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   AT4G39370 (UBP27)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
MIPS: 
TAIR: 
UniProt: 
Position
4
AA seq 505 aa AA seqDB search
MVSRRGSETKAIVCVLTDRIRISNQWVSHLSFAGLLGVAGFVFAQQHGLFRNLNNLKLFS
GREKDSGDDSFLVPGLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQ
LPLTFALSALLQELGTVGSRRSVSNPRKVMVTLTDYAKNFNLTSQQDAAEALLHLISSLQ
EEIVVCYRPSQSSNLSDILFSRNLRMLAPSEGLHGLMELKRWHKHLRGPFDGILGSTLMC
RTCSSQISLEFQFFHTLPLSPLLHHGGYNIMSGCTLEHCLKKFLNTEKVENYFCYRCWHG
AALKYLSVIGAAETEIEKLRSCGGEDQCDCKTSLHLQRMPWSNSYSHILKQLIIARFPKV
FAYSLKLDVKLLCIQVQRASFNMFEEFKLSGHIAFPLVLNLSLFTPSSIGVNIEERIEMS
SEYQKPEASKNHGMYRLVTVVEHFGRTGSGHYTVYRSVRVFSQEEEEEDCDEDLSWFSIS
DSEVCRVSESDVLGAEASLLFYERL
NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt
atggtttctagaagaggctccgagacaaaagcgattgtctgtgtcctcacggatagaatt
aggatctctaatcaatgggtttcgcatttgtctttcgctggtctacttggtgttgctggt
ttcgtatttgcccaacagcacggtctattccgcaacttaaacaacttaaaactcttctcc
ggtagagaaaaagactccggagacgattcttttctcgtacctggccttcaaaatctcgga
aataactgcttcctcaacgtcatcctccaggctctagcgagctgcaaagattttaggagt
tttcttcaatgggttctagaggatgcgagaggttcgttagcaggagaacaagaggaacag
cttcctcttacttttgctttgtctgctttattacaagagctcggcacagttggaagtaga
cgatctgtatctaaccctcgtaaagttatggtgacattgactgactatgccaaaaatttc
aatttgacaagccaacaggatgcagcagaagcccttcttcatcttatatcttctttgcaa
gaagagattgtagtttgttatcgccctagccaaagtagtaatctttcggatatacttttc
tctcgcaacttgagaatgcttgcgcctagtgaaggcctccatggtttgatggagctcaag
agatggcataaacatttgcgtggaccatttgatgggattcttggtagtactttaatgtgc
cgaacttgttcatctcagatttctttggagtttcagttttttcatactctgcctctttct
cctttactccatcacggtggttacaacattatgtctggatgcactttggagcattgcttg
aagaagtttcttaacactgagaaagttgaaaactacttctgctatagatgctggcatggt
gctgcactgaaatatttatctgtgataggagcagctgagacggaaatcgaaaagctcagg
agctgtggcggagaggaccaatgtgactgtaaaacttctcttcatcttcaaagaatgcct
tggtcaaatagctattcccatatattgaaacagttaatcatcgcccgtttcccaaaggta
tttgcttactcattgaaactagacgtgaaactcctatgcattcaagtgcaacgcgcttcg
tttaacatgtttgaggaattcaaactgtcgggacatatcgcatttccacttgtcttgaac
ctctccttgttcacaccatcttcaataggcgtaaacatagaagaaaggattgagatgtcg
tcagagtaccaaaagccagaagcatcaaaaaatcacggcatgtacaggcttgtaacagta
gtggagcattttggtagaaccggaagcgggcattatactgtatacagaagtgtgagagtg
ttctcacaagaggaagaagaagaagattgtgatgaggatttgagctggtttagtatatct
gattcagaagtttgcagagtttcagagagtgatgttcttggtgctgaagctagcttgctc
ttctatgaaaggctttga

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