KEGG   Arabidopsis thaliana (thale cress): AT4G39370Help
Entry
AT4G39370         CDS       T00041                                 

Gene name
UBP27
Definition
(RefSeq) ubiquitin-specific protease 27
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
Enzymes [BR:ath01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     AT4G39370 (UBP27)
Peptidases [BR:ath01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   AT4G39370 (UBP27)
Membrane trafficking [BR:ath04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    AT4G39370 (UBP27)
Ubiquitin system [BR:ath04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    AT4G39370 (UBP27)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: UCH UCH_1
Motif
Other DBs
NCBI-GeneID: 830092
NCBI-ProteinID: NP_568058
MIPS: AT4G39370.1
TAIR: AT4G39370
Araport: AT4G39370
UniProt: Q9FPS0 A0A178UYU2
Position
4
AA seq 494 aa AA seqDB search
MVSRRGSETKAIVCVLTDRIRISNQWVSHLSFAGLLGVAGFVFAQQHGLFRNLNNLKLFS
GREKDSGDDSFLVPGLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQ
LPLTFALSALLQELGTVGSRRSVSNPRKVMVTLTDYAKNFNLTSQQDAAEALLHLISSLQ
EEIVVCYRPSQSSNLSDILFSRNLRMLAPSEGLHGLMELKRWHKHLRGPFDGILGSTLMC
RTCSSQISLEFQFFHTLPLSPLLHHGGYNIMSGCTLEHCLKKFLNTEKVENYFCYRCWHG
AALKYLSVIGAAETEIEKLRSCGGEDQCDCKTSLHLQRMPWSNSYSHILKQLIIARFPKL
LCIQVQRASFNMFEEFKLSGHIAFPLVLNLSLFTPSSIGVNIEERIEMSSEYQKPEASKN
HGMYRLVTVVEHFGRTGSGHYTVYRSVRVFSQEEEEEDCDEDLSWFSISDSEVCRVSESD
VLGAEASLLFYERL
NT seq 1485 nt NT seq  +upstreamnt  +downstreamnt
atggtttctagaagaggctccgagacaaaagcgattgtctgtgtcctcacggatagaatt
aggatctctaatcaatgggtttcgcatttgtctttcgctggtctacttggtgttgctggt
ttcgtatttgcccaacagcacggtctattccgcaacttaaacaacttaaaactcttctcc
ggtagagaaaaagactccggagacgattcttttctcgtacctggccttcaaaatctcgga
aataactgcttcctcaacgtcatcctccaggctctagcgagctgcaaagattttaggagt
tttcttcaatgggttctagaggatgcgagaggttcgttagcaggagaacaagaggaacag
cttcctcttacttttgctttgtctgctttattacaagagctcggcacagttggaagtaga
cgatctgtatctaaccctcgtaaagttatggtgacattgactgactatgccaaaaatttc
aatttgacaagccaacaggatgcagcagaagcccttcttcatcttatatcttctttgcaa
gaagagattgtagtttgttatcgccctagccaaagtagtaatctttcggatatacttttc
tctcgcaacttgagaatgcttgcgcctagtgaaggcctccatggtttgatggagctcaag
agatggcataaacatttgcgtggaccatttgatgggattcttggtagtactttaatgtgc
cgaacttgttcatctcagatttctttggagtttcagttttttcatactctgcctctttct
cctttactccatcacggtggttacaacattatgtctggatgcactttggagcattgcttg
aagaagtttcttaacactgagaaagttgaaaactacttctgctatagatgctggcatggt
gctgcactgaaatatttatctgtgataggagcagctgagacggaaatcgaaaagctcagg
agctgtggcggagaggaccaatgtgactgtaaaacttctcttcatcttcaaagaatgcct
tggtcaaatagctattcccatatattgaaacagttaatcatcgcccgtttcccaaagctc
ctatgcattcaagtgcaacgcgcttcgtttaacatgtttgaggaattcaaactgtcggga
catatcgcatttccacttgtcttgaacctctccttgttcacaccatcttcaataggcgta
aacatagaagaaaggattgagatgtcgtcagagtaccaaaagccagaagcatcaaaaaat
cacggcatgtacaggcttgtaacagtagtggagcattttggtagaaccggaagcgggcat
tatactgtatacagaagtgtgagagtgttctcacaagaggaagaagaagaagattgtgat
gaggatttgagctggtttagtatatctgattcagaagtttgcagagtttcagagagtgat
gttcttggtgctgaagctagcttgctcttctatgaaaggctttga

DBGET integrated database retrieval system