KEGG T00041: AT5G25780

Arabidopsis thaliana (thale cress): AT5G25780

Entry

AT5G25780 CDS T00041

Gene name

EIF3B-2

Definition

translation initiation factor eIF-3 subunit 9

Orthology

K03253

translation initiation factor 3 subunit B

Organism

ath Arabidopsis thaliana (thale cress)

Pathway

ath03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:ath03013]

SSDB

Motif

Pfam:

eIF2A RRM_1 RRM_6 RRM_5 Proteasom_Rpn13

Other DBs

NCBI-GI:

NCBI-GeneID:

MIPS:

TAIR:

UniProt:

Position

AA seq 714 aa
MAAVVDIDVLTAQLGINWSDVNLDSIQLPPGNDFGIESDDESVYQDDQSEFDTGFGNIIV
VDHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLLMPVDPDTKMTLGYCFIEFNTPQEAQ
NAKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQERPYVPGENLQKWLTDDKARD
QLVIRFGHDTEVYWNDARQKKPEPVHKRSYWTESYVQWSPIGTYLVTLHKQGAAVWGGAD
TFTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKG
SADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDN
VVDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGE
YLAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIH
GDQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFF
NVDELETMATAEHFMATDIEWDPTGRYVATSVTTVHEMENGFTIWSFNGNMVYRILKDHF
FQLAWRPRPASFLTAEKEEEIAKNLRNYSKRYEAEDQDVSLLLSEQDREKRRALNEEWQK
WVMQWKSLHEEEKLVRQNLRDGEVSDVEEDEYEAKEVEFEDLIDVTEEIVQELM

NT seq 2145 nt +upstreamnt +downstreamnt
atggcggcggttgttgatattgatgtcctaacagctcagttagggattaattggtcagat
gttaatctcgattcaatccaacttcctcctggaaacgactttgggatcgaaagtgatgat
gaaagtgtttaccaagatgaccagtcagaattcgacactggattcggtaacattatcgtt
gtcgatcacctccctgttgttcccaaggagaagtttgagaaactagaaggtgttgttaag
aaaatttacaaccagttaggtgtgattaaggaaaatggactgttgatgcccgttgatccc
gatactaagatgacattgggctactgttttattgagttcaacactcctcaggaagcacaa
aacgctaaggaaaagtctcatggctacaagttggacaagtctcacatatttgctgttaat
atgttcgatgatttcgataggttgatgaatgtgaaggaggagtgggagcctcctcaagaa
aggccctatgtccctggggaaaatttgcagaagtggcttactgatgacaaagcccgggac
cagctagtcattcgttttggccatgatactgaagtttactggaatgatgctaggcagaag
aagcctgaacctgttcataagcgttcttattggacagagagttatgtgcagtggtctcca
ataggtacataccttgtgacacttcacaagcagggggcagctgtttggggtggtgctgat
acatttacgcgtctcatgcgttatcagcattcaatggtcaaactagttgatttctcgcct
ggtgagaaatatcttgtaacttaccatagccaagaaccaagcaatccgagagatgcaagt
aaagtagagattaaggtctttgatgtgagaaccgggaggatgatgagagatttcaagggt
agtgctgatgagttttcaattggaggacctggtggtgttgctggtgcctcttggcctgtt
ttcagatgggctggcggaaaagatgataaatactttgccaagctgagcaaaaacactatc
tctgtctatgagactgagactttcagcctaatagacaagaaatccatgaaggttgataat
gttgtggatatttgctggtctcccactgattcaatcctttcattgtttgttcctgaacaa
ggtggtggaaaccaaccagccaaggttgctctagtccaaatcccgagtaaggtagagctg
aggcagaagaatctcttcagtgtgagcgactgcaagatgtactggcagagtagtggagag
tatcttgctgttaaggttgatcgatacacaaaaactaagaagagtacatactctggattt
gagcttttccgtatcaaagaaagggatattccaatcgaggttcttgagctggataacaag
aacgataagatcattgctttcgcgtgggagcccaagggtcacaggtttgctgtgattcat
ggtgaccagccaagaccggatgttagtttctactcgatgaagactgcacaaaacactgga
agagtttcaaagctcgcaactttgaaggccaaacaagccaatgccctcttctggtcgccc
acaggcaagtacatcattcttgctgggttaaaaggtttcaatggccagcttgaatttttc
aacgtggatgagctcgagacaatggccacagctgaacacttcatggccacagatatcgaa
tgggacccaactggaaggtacgttgcaacctcagtgacaacagtccacgagatggagaat
gggttcaccatatggtctttcaatgggaatatggtttaccggatactgaaggatcatttc
ttccagttggcttggcgtccaagaccggcatcattcttgactgcggagaaggaagaagag
atagcaaagaacctgaggaattacagcaagaggtatgaggcagaggatcaggacgtgtcg
ttgctattgagtgaacaagacagagagaagaggagggcattgaatgaagagtggcagaaa
tgggtgatgcagtggaagtctctgcatgaagaggagaaactcgtgaggcaaaatcttcgg
gatggtgaagttagtgatgtggaagaagatgagtatgaagccaaagaagttgagtttgag
gatcttattgatgttactgaggaaattgttcaagagttgatgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   MIPS-ATH (1)   
   OC (1)   
   TAIR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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