KEGG   Arabidopsis thaliana (thale cress): AT5G27640Help
Entry
AT5G27640         CDS       T00041                                 

Gene name
TIF3B1
Definition
(RefSeq) translation initiation factor 3 subunit B
  KO
K03253  
translation initiation factor 3 subunit B
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
RNA transport
Brite
KEGG Orthology (KO) [BR:ath00001]
 Genetic Information Processing
  Translation
   03013 RNA transport
    AT5G27640 (TIF3B1)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     AT5G27640 (TIF3B1)
Translation factors [BR:ath03012]
 Eukaryotic Type
  Initiation factors
   eIF-3
    AT5G27640 (TIF3B1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
MIPS: 
TAIR: 
UniProt: 
Position
5
AA seq 712 aa AA seqDB search
MEVVDIDARAAKLGIDWSQVNFDSIQLPPGEDFGIESDDEAVYQDDQSEFDTGFGNIIVV
DHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQN
AKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQARPYVPGENLQKWLTDEKARDQ
LVIRSGPDTEVFWNDTRQKAPEPVHKRPYWTESYVQWSPLGTYLVTLHKQGAAVWGGADT
FTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKGS
ADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDNV
VDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGEY
LAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHG
DQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFN
VDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFTIWSFNGIMLYRILKDHFF
QLAWRPRPPSFLTAEKEEEIAKTLKKYSKKYEAEDQDVSLLLSEQDREKRKALKEEWEKW
VMQWKSLHEEEKLVRQNLRDGEVSDVEEDEYEAKEVEFEDLIDVTEEIVQES
NT seq 2139 nt NT seq  +upstreamnt  +downstreamnt
atggaggtcgttgatattgatgcccgagctgctaagttagggattgattggtctcaggtt
aattttgattccatccaacttcctcctggagaagactttgggatcgagagtgatgatgaa
gctgtttaccaggatgaccagtctgaattcgacactggattcggtaacattatcgtggtc
gatcacctccctgttgttcccaaggagaagtttgagaaacttgaaggtgttgtcaagaaa
atttacaaccagttaggtgtgattaaggaaaatggactgtggatgcctgttgatcccgat
accaagatgacattgggctactgttttattgagttcaacactcctcaggaagcacaaaac
gctaaggaaaagtctcatggctacaagttggacaagtctcacatctttgctgtaaacatg
ttcgatgattttgacaggttgatgaatgtgaaggaggagtgggagcctcctcaggccagg
ccctacgtccctggggaaaatttgcaaaaatggcttactgatgaaaaagcccgagaccag
ctagtcattcgttctggccctgatactgaagttttctggaatgatactaggcagaaggcg
cctgaacctgttcataagcgtccttattggacagagagttatgtgcagtggtctccttta
ggtacataccttgtgacactccacaagcagggggcagctgtttggggtggtgctgataca
ttcacgcgtctcatgcgttatcagcattctatggtaaaactagttgatttctcgccaggt
gagaaatatcttgtaacttaccatagccaagaaccaagcaacccgcgagatgcaagtaaa
gttgagattaaggtttttgatgtgagaaccgggaggatgatgagagatttcaagggtagt
gctgatgagttttcaattggaggacctggtggtgttgctggtgcctcttggcctgttttc
agatgggctggtggaaaagatgataaatactttgccaagcttagcaaaaacactatctct
gtctatgagactgagactttcagcctaatagacaagaaatccatgaaggtagataatgtt
gtggatatctgctggtctcctactgattccatcctttcattgtttgttcctgaacaaggt
ggtggaaaccaacctgcgaaggttgccctagtccaaatcccgagcaaggtggagctgagg
cagaagaatctcttcagtgtgagcgactgcaagatgtactggcagagtagtggagagtat
cttgctgtcaaggttgatcgatacacaaaaactaagaagagcacatactctggatttgaa
cttttccgtatcaaagaaagggatattcccatcgaggttcttgagctggacaacaagaac
gacaagatcattgcttttgcatgggagcccaagggtcacaggtttgctgtgattcatggt
gaccaaccaagaccagatgtcagtttctactcaatgaagaccgcacaaaacactggaagg
gtttcaaagctcgcaactttgaaggccaaacaagctaatgccctcttctggtcgcccaca
ggcaagtacataattcttgctgggttaaaaggtttcaatggccagcttgaatttttcaac
gtggatgagctcgagacaatggccacagctgaacacttcatggccacggatatcgaatgg
gacccgactggaaggtacgttgcaaccgcagtgacatcagtccatgagatggagaatggg
ttcaccatatggtctttcaacgggattatgctttaccggatattgaaggatcatttcttc
cagttggcttggcgtccaagacctccatcattcttgactgcagagaaggaagaagagata
gcaaagaccctgaagaagtacagcaagaagtatgaggcagaggatcaggacgtgtcgttg
ctgttgagtgaacaagacagagagaagagaaaggcattgaaggaagaatgggagaaatgg
gtaatgcagtggaagtctctgcatgaagaggagaaactcgtgaggcaaaaccttcgggat
ggtgaagtaagtgatgtggaagaagatgaatatgaagccaaagaagttgagtttgaggat
cttatcgatgtcactgaggaaatcgttcaagagtcgtaa

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