KEGG   Arabidopsis thaliana (thale cress): AT5G43380Help
Entry
AT5G43380         CDS       T00041                                 

Gene name
TOPP6
Definition
type one serine/threonine protein phosphatase 6
Orthology
K06269  
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ath00001]
 Genetic Information Processing
  Translation
   03015 mRNA surveillance pathway
    AT5G43380 (TOPP6)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     AT5G43380 (TOPP6)
Protein phosphatases and associated proteins [BR:ath01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     AT5G43380 (TOPP6)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     AT5G43380 (TOPP6)
Spliceosome [BR:ath03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    AT5G43380 (TOPP6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
MIPS: 
TAIR: 
UniProt: 
Position
5
AA seq 323 aa AA seqDB search
MDPGTLNSVINRLLEAREKPGKIVQLSETEIKQLCFVSRDIFLRQPNLLELEAPVKICGD
IHGQYPDLLRLFEHGGYPPNSNYLFLGDYVDRGKQSLETICLLLAYKIKFPENFFLLRGN
HESASINRIYGFYDECKRRFSVKIWRIFTDCFNCLPVAALIDERIFCMHGGLSPELLSLR
QIRDIRRPTDIPDRGLLCDLLWSDPDKDVRGWGPNDRGVSYTFGSDIVSGFLKRLDLDLI
CRAHQVVEDGFEFFANKQLVTIFSAPNYCGEFDNAGAMMSVSEDLTCSFQILKSNDKKSK
FSFGSRGGAKTSFPYPKVKDCNW
NT seq 972 nt NT seq  +upstreamnt  +downstreamnt
atggatcctggtactttaaactcggtgatcaataggttgcttgaagctagagaaaaacca
ggaaagattgttcagttgtctgaaacagagatcaaacagctctgtttcgtctctagagat
atcttcttgagacaaccaaatctcttggaacttgaagctcctgttaaaatatgtggggac
attcatggacaatatccggatctcttgagactattcgaacatggcggataccctcctaat
tcaaactacttgtttcttggagattatgtcgatcgcggcaagcaaagcctcgaaacgatt
tgtcttttacttgcttacaagattaagttccctgaaaacttcttccttctcagaggaaac
catgaaagtgcatcaatcaatcgtatttacggcttctatgacgagtgtaaacgtagattc
agtgtcaagatttggcgaatcttcactgattgcttcaactgtctccccgtcgctgcactc
atcgatgagcggattttttgtatgcatggtgggctctccccggagctgctaagcttgagg
cagattagggatattcgtcgtccaacggatattcctgatcgtggtttactctgtgatctc
ttgtggtctgatcctgataaagatgttagaggttgggggcctaacgatcgcggagtttct
tacacttttggatcagatatagtttctggatttcttaaaagactcgatcttgacctcatt
tgtagggctcaccaggttgttgaagatggattcgagttctttgcgaataagcagctcgta
acgatattctctgcgccgaattactgtggggaatttgacaatgcaggtgcgatgatgagt
gtgtctgaggatttgacctgctcttttcagatcttaaaatctaatgacaagaaatcaaag
ttcagtttcggaagcagaggtggtgctaaaactagcttcccttatcctaaagtgaaggat
tgtaattggtag

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