KEGG T00041: AT5G51200

Arabidopsis thaliana (thale cress): AT5G51200

Entry

AT5G51200 CDS T00041

Definition

hypothetical protein

Orthology

K14310

nuclear pore complex protein Nup205

Organism

ath Arabidopsis thaliana (thale cress)

Pathway

ath03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:ath03013]

SSDB

Motif

Pfam:

DUF3414

Other DBs

NCBI-GI:

NCBI-GeneID:

MIPS:

TAIR:

UniProt:

Position

AA seq 1838 aa
MVSPKDLVAIVHSSLLGTSRPTPTQRIELTHAIRNSFPSLQNLLSFPPPKPSDRAQVQSK
EIRLPDSLPISLDDQDIAISLKLSDELHLNEIDSVRLLVSSNQEWGLMGRDPLEIQRLAT
GLWYTGRRDLTSTLYTLLRAVVLDEGLEPDLIADIQGLLEELIEAGLRQRLITLIKELNR
EDPTGLGGPLCERYLIDSRGALVERRAVVQRERLILGHCLVLSILVDRPGSKDVKDIYYI
LKDNAAQLTEGNDTISSQITFSLLFSLIITFVSDAISRLSDKSSMISQDASFRTDFQDIV
MASGSDPTADGFIGGIRLAWAVHLMLIHDGISGMDTISTASTTDMGHICSCLESIFSKNV
FQFLLDNVLRTAAYQNDEEDIIYIYNAYLHKLASCFLSHPIARDKVKESKDMAMSVLNSY
RTSDPLDGSMQTEESDRPLPFISLMEFKEPELLSGNDVLWTFVNFAGEDHTNFKTLVAFL
EMLCTLASTQEGASKVYELLRGTSFRSIGWPTLFDCIRIYDEKFKQSLQTAGAMMPEFLE
GDAKALVAYLNVLQKVVENGNPTERKNWFPDIEPFFKLLGYENIPPYLKGALRKTIAAFV
NVFPEMRDSIWAFLEQYDLPVVVGSQVGKSDQSSQVYDMQFELNEVEARREQYPSTISFL
NLINALIAGEKDVNDRGRRAYSDPCEKWQLVVACLQHFHMILSMYDIQEEDLDGFTEHPH
FLVSLETSSLQTQLPIIELLKDFMSGKALYRNLMGILQVGVNSIISERLSKTYGKILEKA
VQLSLEILLLVFEKDLLVSDVWRPLYQPLDIILSQDHNQIIALLEYVRYDSLPQIQRSSI
KIMNILRCSRLVGLVPMLIKIDAANSLIEDYAACLEGRLEEGEVVENSCDDLGVLIMQLL
VDNINRPAPSITHLLLKFDLDAPVEGTVLQPKFHYSCLKVILEMLEKLPNPDINFLLFEF
GFQLLCELNLDPLTSGPTMDLLSSKKYQFFLQHLDTIGVATLPKRSGSQALRISSLHQRA
WLLKLLAIALHTGSGSSSAHLEACQSILSHLFGREVTEAANEPFSSSTYPQDGLDYAGTS
SISKSKALALLEILQFRSPDASMQLPQIVSSLKYDSLVEDILGNRDTSVSGSIYYYSERG
DRLIDLSSFSNKLWQKLHSGFPLVDSFPNVAELSEVRETIQQLLKWGWKYNRNLEEQAAQ
LHMLAGWSQIVEVSACRRISSLDNRSEILYRILDASLSASASPDCSLKMAFVLTQVALTC
IAKLRDDRFSFQGALSSDTVTCLDVMMVKHLSTGACHSVLFKLVMAILRHESSESLRRRQ
YALLLSYFQYCQHMIALDVPTSVVQFLLLNEQDGEDLDIQKIDKEQADLARANFFIIKKE
AQGILDLVIKDASQGSEFGKTISLYVLEALVCIDHERYFLSQLQSRGFIRSCLGSISNIS
YQDGTHLLESQQRACTLEAELALLLRISHKYGKSGGQVLFSMGALEHIASCRAISFKGNM
RRVDMKLQSDVGYNVQKQRTIITAVLRLVFALTSLVETSEFFEGRNKIVRDVVEFIKGHQ
SLFDQLLREDFTQADDLLMEQIILAVGILSKVWPFEENDGYGFVQGLFDMMSKLFIASPI
KSILSQGSELKLSQLRFSLTSYLYFLVTKNSLRLQVSDDSLDSSTKLRQPTLLLLASLLS
HVTDSLERAAEKKSLLLHKIRDINELSRQDVDAIIKICDSQEYVTPSDNIHKRRYIAMVE
MCQIVGNRDQLITLLLQLAEHVLNIILIHLQDRSVSSNERGSYGSKSHIQQEVTDLCGKL
SPTIDRLALLNEGKVGHNLKVFQRLATTVKEMAIQKCV

NT seq 5517 nt +upstreamnt +downstreamnt
atggtgtcgccgaaagatttagtggcgatagtacactcttcgctgctcggaacatcccgg
ccaactccaacgcagcgtatcgaactcactcatgccattcgcaactcatttccctctctt
cagaacctcctctctttcccgcctccgaagccgtcggacagagcgcaagttcagtccaaa
gaaattcgactcccggattcgctgccaatatctttggatgaccaagatatcgctattagc
ttgaaactgagtgatgagcttcacctaaatgagatagattctgttcgtctgcttgtatct
tcgaatcaggagtggggcttaatgggacgagaccctcttgagattcaacggcttgcaact
ggactatggtatacagggagaagagatcttacatcaacgctatacacactcctgagggca
gttgttctggacgaggggcttgaacctgatcttatagctgacattcagggactcttagaa
gaactgattgaagctgggctcagacaacggttgattactcttataaaggaactcaatcgg
gaggatcctactggactgggtgggcccttatgcgagcgataccttattgactcaagaggt
gctcttgttgaacgaagagctgttgttcagagggaaagattgatactgggacattgcctt
gttctttcaattttggttgatagacctggttcgaaagatgtgaaggatatatactatatt
ttaaaagataatgcagctcaattaactgaaggaaatgacaccataagttctcagattact
tttagtcttctgttttctctcatcatcaccttcgtatcagatgcaatcagcagactatct
gataagtcatctatgatatctcaagatgcttcatttaggacagactttcaggatattgtc
atggcttctggcagtgaccccactgctgatggcttcattggtggcataaggcttgcctgg
gctgtacatttaatgctgatacatgatggaatatcgggaatggatacaatttccactgct
tcaacaacagatatggggcatatatgctcctgcctggagtccatcttctcaaaaaacgtg
tttcaatttttgctggataatgttcttcgaactgcagcctaccagaatgatgaggaggac
attatctacatatataatgcttatctgcacaagttagcctcttgttttttatctcacccg
atcgcaagagataaggtgaaggaatcaaaggacatggctatgagtgttctaaattcttac
cgaacttctgatccgcttgatggaagtatgcagactgaagagtctgacaggccactgccc
ttcatttctcttatggagtttaaggaacctgagctactctccgggaatgatgtcttgtgg
acttttgtgaattttgctggagaggaccacacaaattttaaaactcttgtggctttcttg
gaaatgctgtgtaccttggcttccactcaggaaggtgcttctaaagtttatgagttgctc
cggggtacatcatttcgcagtataggatggcccactttgtttgattgtataagaatttac
gatgagaagttcaagcagtctcttcaaactgctggagccatgatgccagagttcctggag
ggcgatgcaaaagcacttgtcgcttatctgaatgtacttcagaaggttgttgaaaatggt
aatcccactgagaggaaaaactggtttcctgatatcgaaccattttttaagcttctgggt
tacgaaaacatccctccatatctgaagggtgctcttagaaagaccattgctgcctttgtt
aatgtctttccagaaatgagggactctatctgggcttttcttgagcagtatgatctgcct
gttgttgtgggatcacaagttggaaagagtgaccaatcttctcaggtctatgatatgcaa
tttgagttaaatgaagtggaagcaaggagagaacagtatccttcaacaatatcgttcctt
aatcttataaatgctctgattgctggagagaaagatgtgaatgatcgtgggcgtagggca
tattcagatccctgtgagaagtggcaattggttgtggcatgccttcaacattttcacatg
atcttaagcatgtatgatattcaggaggaggatcttgatggatttactgagcatccacat
tttctggtgtcacttgaaacatcttcactgcaaacgcagctgccaattatagaattacta
aaagatttcatgagtgggaaagctctctataggaacctcatgggtatccttcaggttggg
gtcaattccatcatcagcgagcgattgagtaaaacttatgggaagatcttagaaaaggct
gtacaactttctttggaaatcttactactcgtctttgagaaggatttgcttgtttccgat
gtttggcgtccgctgtaccagcctttggatataattctctcacaagatcataatcaaatt
atagccttgttggagtatgtcagatatgattctcttcctcagattcagcgatcttcaatc
aaaatcatgaacattttaaggtgttctcgcttggttggacttgttccaatgctgatcaaa
attgatgctgcgaattccttgattgaggattatgccgcctgccttgagggacgacttgaa
gagggtgaagttgtagagaacagttgtgatgatctaggggtccttattatgcagcttctg
gttgataatatcaaccggcctgccccaagtatcacacatttgcttctgaagtttgatctt
gatgcccctgtggaagggacagttttgcagccgaagtttcactacagttgtctgaaggtc
attcttgaaatgctggagaagcttccaaaccctgatataaacttcttactctttgagttt
ggcttccagcttttgtgtgagttgaatttggatccactaactagtggtccaaccatggat
ctattgagcagcaaaaaatatcagttttttctccagcacctcgataccatcggtgttgcc
actcttccaaaaagaagtggcagccaagcactccgtattagttcccttcatcagagggcg
tggctattaaagctcctagctattgcactgcatactggttctggaagcagttcagctcac
ctagaggcatgtcagagcatactttctcatctttttgggcgggaggtaactgaagcagcg
aatgaacctttttcttccagtacatatcctcaggatggtcttgattatgctggaactagt
tcaatcagtaaaagtaaggcattggctttgcttgaaattcttcagtttagatctcctgat
gcttcgatgcagcttcctcaaattgtgtcaagcctaaagtatgactcattggtggaggac
atacttgggaaccgtgatacctctgttagcggcagtatttactattattctgagcgtggt
gatcggctaattgatctatcttccttcagcaacaaactctggcagaaactacattctgga
tttcccctagtagatagttttccaaatgttgctgagctgagtgaagttagagagacaatt
caacagctgttgaaatggggctggaagtataaccgaaaccttgaggagcaagctgcccaa
cttcatatgttagctggctggtctcagattgttgaggtgtctgcttgcagaagaatatct
tctcttgataaccggtctgaaattttgtaccggatacttgatgcctctcttagcgcctcc
gcgtctccagattgttcattaaaaatggcgtttgtactcactcaggttgcccttacctgc
attgccaaacttcgtgatgatagattttcatttcaaggggccttgagttctgataccgtg
acatgtctagatgttatgatggtcaaacatttatccactggtgcttgccactcagttcta
tttaaacttgttatggcaattctaaggcatgagtcatcagaatccttgagaaggcgccaa
tatgcattgctcttgagctatttccagtactgccagcatatgattgctcttgatgtgcca
acatcagttgtgcagttcttgttacttaatgagcaagatggtgaagatttggatatccag
aagattgacaaggagcaggctgaccttgctcgtgccaacttttttattataaagaaagaa
gctcagggcatcttggatctggtaatcaaggatgcaagtcaaggcagtgagtttgggaaa
acaatatcactttatgtgctggaagctcttgtttgtattgatcacgagagatattttctt
agtcagctccagagcagaggtttcatacgatcttgtcttggaagcattagtaatatctcc
taccaggatggaacacatttgctggagtcacaacagcgagcttgtacgttagaagcagaa
cttgcattgctacttagaattagtcacaagtacggaaagtctggaggccaggttctgttc
tccatgggtgcgctggaacatattgcttcatgtagagctatcagctttaagggaaatatg
aggcgtgtggatatgaaacttcagagtgatgtaggatataatgtgcaaaagcaacgaacg
ataatcactgctgtcctaagactggtgtttgctctaacctcattggttgagacctctgaa
ttttttgaggggaggaataaaattgttcgtgacgtcgttgagtttatcaaaggacatcaa
tctctgtttgaccaacttcttcgtgaagactttactcaagcagatgatttattgatggag
caaattattcttgcagtgggaatattgagcaaggtctggccttttgaagagaacgatgga
tatggatttgttcaagggctatttgatatgatgagcaagcttttcatcgcctccccgatt
aaatcgatattatcgcagggatcagagctcaaattgtctcagttgcgattcagcttgact
tcttacttatattttctggtgaccaaaaattctctgaggttacaggtttcagatgattct
cttgatagttccactaaactacgccaaccaacattgctgttgcttgcatctcttctttcg
catgtgactgattccctcgagagagcagcagagaagaagtccttacttcttcataagatt
agagacataaacgagctctcaagacaagatgtagatgcgatcatcaagatctgtgattcc
caagaatatgtcacaccgtccgacaacatacataaaaggagatacatagctatggttgaa
atgtgccaaatcgtgggtaacagggaccagttaatcaccttgttactgcaacttgccgag
catgtactaaatattatcctgatccatctccaagatagatccgttagttcaaatgaaagg
ggatcatatggttcaaaatcccatatacaacaggaagttacagatctctgtggcaaattg
tcacctaccatagataggcttgcattactgaatgagggaaaagtaggacataacctgaag
gtgttccagagactggcaacgactgtaaaagaaatggccatccaaaagtgtgtatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   MIPS-ATH (1)   
   OC (1)   
   TAIR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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