KEGG T00041: AT5G60410

Arabidopsis thaliana (thale cress): AT5G60410

Entry

AT5G60410 CDS T00041

Gene name

SIZ1

Definition

E3 SUMO-protein ligase SIZ1

Organism

ath Arabidopsis thaliana (thale cress)

Class

SSDB

Motif

Pfam:

zf-MIZ PHD SAP zf-Sec23_Sec24 zf-HC5HC2H

Other DBs

NCBI-GI:

NCBI-GeneID:

MIPS:

TAIR:

UniProt:

Structure

PDB:

1WEW

Position

AA seq 832 aa
MDLEANCKEKLSYFRIKELKDVLTQLGLSKQGKKQELVDRILTLLSDEQAARLLSKKNTV
AKEAVAKLVDDTYRKMQVSGASDLASKGQVSSDTSNLKVKGEPEDPFQPEIKVRCVCGNS
LETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTRADPFWVTVAHP
LSPVRLTATTIPNDGASTMQSVERTFQITRADKDLLAKPEYDVQAWCMLLNDKVLFRMQW
PQYADLQVNGVPVRAINRPGGQLLGVNGRDDGPIITSCIRDGVNRISLSGGDVRIFCFGV
RLVKRRTLQQVLNLIPEEGKGETFEDALARVRRCIGGGGGDDNADSDSDIEVVADFFGVN
LRCPMSGSRIKVAGRFLPCVHMGCFDLDVFVELNQRSRKWQCPICLKNYSVEHVIVDPYF
NRITSKMKHCDEEVTEIEVKPDGSWRVKFKRESERRELGELSQWHAPDGSLCPSAVDIKR
KMEMLPVKQEGYSDGPAPLKLGIRKNRNGIWEVSKPNTNGLSSSNRQEKVGYQEKNIIPM
SSSATGSGRDGDDASVNQDAIGTFDFVANGMELDSISMNVDSGYNFPDRNQSGEGGNNEV
IVLSDSDDENDLVITPGPAYSGCQTDGGLTFPLNPPGIINSYNEDPHSIAGGSSGLGLFN
DDDEFDTPLWSFPSETPEAPGFQLFRSDADVSGGLVGLHHHSPLNCSPEINGGYTMAPET
SMASVPVVPGSTGRSEANDGLVDNPLAFGRDDPSLQIFLPTKPDASAQSGFKNQADMSNG
LRSEDWISLRLGDSASGNHGDPATTNGINSSHQMSTREGSMDTTTETGLFPV

NT seq 2499 nt +upstreamnt +downstreamnt
atggatttggaagctaattgtaaggaaaaactttcatattttcggataaaagagctcaag
gatgtgctcactcagctgggactttcgaaacagggaaagaagcaggaacttgtcgaccgg
atcttgacccttctttctgatgaacaagctgccaggttgttgtctaaaaagaatacagtg
gcaaaggaagcagttgccaaattagtggacgatacatataggaaaatgcaagtatctggg
gcaagtgatttagcatcaaaaggacaagtgagttcagataccagtaatctgaaagttaag
ggagagcctgaagaccccttccaaccagaaattaaagttcgatgtgtttgtggaaactcg
ctagaaacagactcaatgatacagtgtgaggatccaagatgccatgtttggcagcatgtt
ggctgtgttattctcccagataagcctatggatgggaatccaccacttccggaatcattt
tattgtgaaatctgccgacttactcgagctgacccattttgggttacagtggcacatcca
ctctctccagtgaggctgactgcaacgactatcccaaatgatggtgcaagcacaatgcag
agtgtggagagaacatttcaaatcacaagggcagacaaggaccttttggccaaaccagag
tacgatgttcaggcttggtgtatgctcttgaatgataaagttctctttaggatgcagtgg
cctcagtatgctgatctgcaggtcaatggtgtgcctgtacgtgcaattaatcgacctgga
ggacagcttttgggagtcaacggccgcgacgatggacccattattacatcttgtattagg
gatggagttaacagaatatccttgagtggaggtgacgttcggattttttgttttggggtc
agacttgtgaagcgcaggactctacaacaggttctaaatttgattccagaagagggtaaa
ggggagacttttgaagatgctcttgcacgtgtccgccgatgcattggaggtggaggtgga
gatgataatgccgacagtgatagtgacattgaagttgttgctgatttcttcggtgtcaat
cttcggtgtcctatgagcggttctaggataaaagttgctgggagatttttaccctgtgtg
cacatgggctgttttgaccttgatgtgtttgtggagttgaatcaacgttccagaaagtgg
cagtgccctatttgtctgaagaactactcagtggagcatgtaatcgtcgatccttatttt
aaccgtatcacgtctaagatgaagcattgtgatgaagaggtgactgaaattgaagtgaaa
cctgatggttcttggcgtgtaaagttcaaaagagagagtgagcgaagggaactgggggaa
ctctcacagtggcatgcacctgatggtagcctttgcccctctgctgttgatattaaacgg
aagatggaaatgttaccggttaagcaagaaggttactcagatggtccagccccgctaaaa
cttggaataaggaagaatcgtaatggcatttgggaagttagcaaacctaatacaaatgga
ttatcttccagtaataggcaagaaaaggttgggtatcaggagaagaatattataccaatg
agtagtagtgctactggaagtggtagggatggtgatgatgcaagcgtaaaccaggatgct
attggaacttttgactttgtagccaacggcatggaacttgattccatttccatgaatgtt
gattcaggttataactttcctgacagaaaccaatctggcgagggtggaaataatgaagtc
atcgttctgagtgattctgatgacgagaatgatttagtgatcactccagggcctgcatac
agtggttgtcaaacagatggtggacttacttttccactgaaccctcctggaataattaac
tcatataatgaggacccacacagcatagctgggggaagttcaggcttaggtcttttcaat
gatgatgatgaatttgatacgcccctttggtcatttccttctgaaactccagaagcccct
gggttccaactatttagatctgatgctgacgtttcaggaggtttagttggtttgcatcat
catagtccactaaactgttctcctgaaataaatggaggttataccatggctcctgagaca
tcaatggcatctgttcctgtggttcctggctctactggccgatctgaagcaaacgatggc
ctagttgacaatcctcttgcatttggtagagacgatccctcacttcaaatatttttgcca
acaaaaccagatgcttcagctcagtcgggttttaaaaaccaagctgatatgtcaaatggt
ctccgtagtgaagactggatctcgcttaggctaggcgatagcgcctctgggaatcatgga
gatcctgcaactacaaacgggattaactcaagccatcagatgtctacgagggaaggttct
atggatactacaacagagactggtttgttccctgtctga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   NCBI-Gene (1)   
   NCBI-GI (10)   
   UniGene (1)   
   MIPS-ATH (1)   
   OC (1)   
   TAIR (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (23)   
   RefSeq(nuc) (5)   
   GenBank (9)   
   EMBL (9)   
3D Structure (1)   
   PDB (1)   
Protein domain (5)   
   Pfam (5)   
All databases (51)   

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